Corylus avellana (European hazelnut): 132165324
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Entry
132165324 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132165324
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132165324
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132165324
Protein phosphatases and associated proteins [BR:
cave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132165324
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Helicases
132165324
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
HerA_C
Motif
Other DBs
NCBI-GeneID:
132165324
NCBI-ProteinID:
XP_059431819
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All DBs
Position
ca11:complement(22116541..22121179)
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AA seq
599 aa
AA seq
DB search
MATKRSEKASSKEAETKSKELKDSEIFASCSFSSLGLQVSLCDQLRERMGFEVPTLVQAQ
AIPVILSGRHVLVNAATGTGKTVAYLAPIIHHLQGDQPRVQRSDGTFALVLVPTRELCMQ
VYEILQKLLHRFHWIVPGYITGGENRSKEKARLRKGISILVATPGRLLDHLKNTTSFLHT
NLRWIIFDEADRILELGFGKEIKEILDLLGSRKKGHVGKENDDSYNSKPQRQNVLLSATL
NEKVNHLAKISLENPVMIGLDDKKIQPVLSFKGLGSNVNDEFEYPVKSTSSSIGDFRVPD
QLVQRYVKVPCGSRLAVLLSILKHLFERGTSQKIVVFFSTCDAVDFHYYLLSAFKFSAHS
QPDEELRQMLVRCKTFRLHGNMKQEDRRTTFQAFKTEKLSLLLSTDIAARGLDFPEVRFI
IQYDSPGEATEYVHRVGRTARLGERGDSLLFLQPVEMDYLLDLEKHGISLTEYPLLKVLD
SFPLYNEKNYVKKVLTLEFHPWVLLVQKALESFILSEPTIKNLAKNAFCSWVRAYTAHRG
ELKRIFMLKKLHLGHVAKSFALKEQPSLVGQSFQKQTKKRKRDEKQRGLSKKRKFVRKT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagagaagcgaaaaagccagtagtaaagaagcagagacgaagagcaaggaa
ctcaaagatagcgagatattcgcatcatgctctttctccagcctcggcctccaagtctcc
ttatgcgaccagctccgagaaaggatgggcttcgaagtcccgaccctggtacaggcccaa
gcgattccggttattctctccgggcgtcacgtacttgtgaatgctgctactgggacgggc
aaaacggtggcgtacttggctccgattattcatcacttgcagggggaccaacctcgtgtt
cagcgctctgatggaacttttgcgttggtccttgtaccaacgcgggagctatgcatgcag
gtttatgaaattttgcagaagttattgcaccgatttcattggattgtcccgggttatata
acgggtggtgaaaacaggtcaaaggagaaagccaggctgcgcaaaggcatatctattctt
gttgcaactcctgggcgccttttggaccacttaaagaatacaacatccttcttgcacact
aatttgcgttggataatctttgacgaagcagataggattttggaattaggatttgggaaa
gaaataaaggaaatactagatcttttgggttccaggaaaaagggccatgttggcaaggag
aatgatgattcatataattctaaacctcagaggcagaatgtgttattatcagctacctta
aatgaaaaagtaaatcatcttgctaaaattagtttagagaatcctgttatgattggcctt
gatgacaagaagatacagccggtattatcatttaaaggtttgggatctaacgtgaatgat
gaatttgaatatcctgttaaatccacgagctcttcaattggagatttccgggttccagat
caattagttcagagatatgtgaaagtaccctgtggctcacggcttgctgtacttctttcc
attctaaagcatctttttgagagaggaacaagccaaaagattgtggtattcttttcaaca
tgcgatgcagtagattttcactattatctgttaagtgcattcaagttctcggctcattca
caaccagatgaagaactaagacagatgttagttcgttgcaaaacttttcgattacatggg
aatatgaagcaggaggatagaagaaccacgtttcaggctttcaaaacagaaaaattgtct
cttctcttgtccacagatattgctgctagaggcttggattttccagaagttagatttatc
atacaatatgattctccaggagaggctacagaatatgtgcatagagttggaagaactgct
cgcttgggtgaaagaggagattcattgttgtttttgcaaccagttgaaatggattattta
ctggacctggagaaacatggcatatcactaactgagtatcccctccttaaagtgttggat
agttttccattgtacaatgagaagaactatgtcaagaaggttctgactttagagtttcat
ccctgggtgctacttgtgcagaaggcacttgaatcatttatcctatccgagcctacgatc
aagaacctagccaagaacgcattttgctcctgggtacgtgcatacactgcccatcgtggt
gagctgaaaagaatttttatgctgaagaaacttcacttggggcatgtcgcaaagagcttt
gcattgaaagaacaaccctccttagttggacagtcattccaaaagcaaacaaagaagaga
aagagagatgaaaagcaaagggggctgtcgaaaaagaggaagtttgtgcgtaaaacatga
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