Corylus avellana (European hazelnut): 132165371
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Entry
132165371 CDS
T09426
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
132165371
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cave01001
]
132165371
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132165371
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132165371
Protein kinases [BR:
cave01001
]
Serine/threonine kinases: Other
VPS15 family
132165371
Membrane trafficking [BR:
cave04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132165371
Autophagy
Autophagosome formation proteins
PI3K complex
132165371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
HEAT
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NBCH_WD40
EIF3I
Beta-prop_EML_2
HEAT_EZ
HEAT_2
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Cohesin_HEAT
APH
TCAD9
Motif
Other DBs
NCBI-GeneID:
132165371
NCBI-ProteinID:
XP_059431882
LinkDB
All DBs
Position
ca11:complement(20254697..20265151)
Genome browser
AA seq
1549 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFLKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLFQIKEIFRSLDNPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LSPVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDATLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDSGVRKMILHMIQLEPESRLSAESYLQEYAAVVFP
SYFSPFLHNFYCYLNPRHSDVRVALCQRVFQEILKQMMNNRSSEDTGTGLATPSKSTSGE
LSQEMVAKQNVSLTKDSLRKKEQTEKGLIHDQFELIGDLNTLLRDVKPNNHYPDAKPMLE
DAPDSAFSPSLKSYGIQSPGDLLQTISNAFRRNDHPFLKKITMNDLNTLMSEYDSQSDTF
GMPFLPLPEDNMRCEGMVLIASLLCSCIRNVKLPHLRRAAVLLLKSSALYIDDEDRLQRV
LPYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPVYIFPMLSMLPDDPEESV
RICYASNIAKLALTAYGFLIHSISMSEAGVLDELTLAQKPLASSNETSERLQRINSDAQL
AQLRKSIAEVVQELVMSPKQTPNIRRALLRDIGNLCCFFGQRQSNDFLLPILPAFLNDRD
EQLRAVFFGQIVYVCFFVGQRSVEEYLLPYIEQALSDATEAVIVNAFECLAVLCRRGFLR
KRILLEMIERAFPLLCYPSQWVRRSAVTFIAASSESLGAVDSYVFLAPFIRPFLRRQPAS
LASEKALLSCLNPPATRQEYYQVLENARSSDMLARQRKIWYKIAPNSKQWESMDLLNRGS
IKNWPDNQQTPEAQTPVDKALQQPELSESDDGEAKLRGMGNFMRNAASTVDIRDPLCSEK
LKFSGFMSPQVNGVSSFMCDKSSEGIPLYSFSLDRRAVGIPPAASDSPLQANSPGIGSSS
IPWMDPVNKSFSLASSVPAPKLVSGSFSISNGSKQFHRVVHEPDGNDNDQMAYANTKSQE
IGSSGMLKSSSITVEDASTSTDLIGLPAFARTSSIPDSVWRPRGVLVAHLQEHCAAVNDI
AVTTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCAAMLRGSAQVIVG
ACDGMIHIFSVDYISRGLGNVVEKYSGIADVKKKDIKEGAILSLLNYSADSCFSQMVMFS
TQNCGIHLWDTRKNSSSWTLKATPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP
VNSWHYSLPCPIEKMCPFIPPSNASLPTTARPLIYVAAGCNEVSLWNAENGSCHQVLRVA
NYDTDAEMYDGPWALARPSSKSNSKPDPRRNVNPRYRVNELNEPPSRLLGIRSLLPLPGG
DLLTGGTDLKIRRWNHYSPDQTYCICGPNLNGVGNDDFYEARSSFGVQVVQETRRRPLTT
KLTAKAVLAAAATDSAGCHRDSILSLASVKLNQRLLISGSRDGALKVWK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaagatcgctcgcacgacccaagtctcggcctccgagtactacctccacgac
ctgccgtcgtcgtacaacctggtcctgaaggaggtcctcggccgaggccggttcttgaag
tcgattctctgcaagcacgacgagggcctcgtcctcgtcaaggtctatttcaagcgcggc
gactccatcgatctcagggagtacgagcgccgtctcttccagatcaaagagatcttccgc
tccctcgacaacccccacgtttggcccttccagttctggcaagaaacagataaagcagct
tatcttttgaggcaatacttctttaacaatcttcacgatcggttgagtactcggcctttc
ctcagccctgtcgagaagaagtggttggcttttcagttacttcttgccgtgaaacagagc
cacgagaaaggagtttgccatggtgatattaagtgtgagaatgtgctggtcacatcttgg
aattggctttaccttgccgactttgcatccttcaaacccacttacattccctatgatgac
ccttcggatttctccttcttctttgacactggaggaagaagactctgttatcttgcacct
gagagattttatgagcatggaggtgagatgcaggttgcacaagatgcaactttgaggccg
tctatggatatctttgccgtagggtgtgtaatagcggagcttttccttgagggtcagcca
ctatttgaactctcccagcttcttgcttaccgcagagggcaatatgatcctagccaacat
cttgagaagatccctgattctggagtccgaaagatgatactacatatgattcagttagaa
ccagagtcacgactttctgctgaaagctacctgcaagaatatgcggccgttgtgtttcca
agctatttctcaccatttctgcataatttctactgctacttgaatcctcgtcattcggat
gtgagggttgcactgtgccaaagagttttccaagagatacttaagcaaatgatgaacaat
aggtcatctgaggatacaggtactggacttgctacaccttctaaaagtactagtggtgaa
ctgtcgcaagagatggttgcaaaacaaaatgtcagtttgacaaaggattcgttgagaaag
aaagagcagacagagaaaggcttaattcatgatcagtttgaacttatcggtgatctcaat
acgcttctcagggatgttaaaccgaataatcattaccctgatgccaagccgatgcttgaa
gatgcgcccgattctgcattttccccaagtcttaaaagctatgggatacaatctcctggt
gatctacttcaaactatctccaatgcatttaggagaaatgatcatccctttctgaaaaag
attacaatgaatgatttgaatacattgatgtcagagtatgacagccaatcagatacattt
ggcatgccctttttaccattacctgaagataatatgagatgtgaaggtatggttctgatc
gcttctcttctttgctcctgtatacgaaatgtcaagttgcctcatttgaggagggcggct
gttcttttgctcaagtcttctgcactatatattgatgacgaagatcggttgcagcgagtg
cttccatatgttattgcaatgctttcagatccagcagcaattgtgcgttgtgctgccttg
gagactttgtgtgacatcctgcctttagttcgagattttcctcccagtgatgcaaaaatt
tttccagtgtatatttttccaatgctttccatgcttcctgatgatccagaggaaagtgta
agaatttgttatgccagcaatattgctaagctggcactaactgcttatggattcttgatt
cactcaataagcatgagtgaggcgggggtccttgatgaattgactctagcacagaagcca
ttggcatcatccaatgagacgtctgaacgacttcaaaggataaatagtgatgcacaacta
gcacagctgaggaagtccattgcagaggtcgttcaagagcttgttatgagtccaaagcag
acaccaaatatcaggagagcactcctacgggacattggcaatctatgctgcttctttggc
cagagacagagtaatgactttctgttgcccatcttacctgcttttcttaatgatcgagat
gagcagctaagggcagtgttctttgggcaaattgtgtatgtatgtttttttgtgggacaa
agaagtgtggaggaatatcttttaccttacattgagcaggctttaagtgatgcaactgag
gctgtaattgtcaatgcttttgaatgcttggctgttttgtgtagaaggggtttcttacgg
aagaggatactgctggagatgatagaacgagcatttccgttgttatgttatcccagtcag
tgggtacgaaggtcagctgtcactttcattgctgctagcagtgagagcttaggtgcagta
gattcttatgttttccttgccccatttatacggcctttcctccgtagacaaccagcatct
ttagcttctgagaaggctctcctttcatgtttaaatcctccagccacaagacaggaatat
tatcaagtcttagaaaatgccaggagttcggatatgttggcgagacagagaaagatatgg
tacaagatagcaccaaattctaaacaatgggaaagcatggatttactcaatagagggtca
attaagaactggccagataaccaacaaactcctgaggctcaaacacctgtagacaaggca
ttgcaacagccagagttaagtgaatctgatgatggtgaggccaagttgagaggtatggga
aattttatgcgtaatgctgctagcacagttgatattcgtgatcccctatgctcagaaaag
ctaaaattctcaggctttatgtcgccacaggttaatggtgtgagtagttttatgtgcgat
aaatcatcagaaggcattccgttgtactcctttagcttggacaggcgggcagttggaatt
cctcctgccgcgtctgattctccattacaagcaaattccccaggaattggttcatcatcc
ataccttggatggatcctgtaaataaatcatttagcttggcaagttcagttccagcacct
aagcttgtttcaggctcattcagcatcagcaatggttctaaacagttccatagagtggtg
catgagcctgatggcaatgacaatgatcaaatggcctatgccaataccaaatctcaagag
attggatcatctggcatgctgaaaagcagttctattactgtggaagatgcctccacttca
actgatctaattggactgccagcttttgcacggacatcatcaattccagattcggtttgg
aggccacgtggggtgttggttgcacaccttcaggagcattgcgctgcagttaatgacata
gctgtaacaaccgatcatagcttttttgtgagtgcatctgatgattccactgtcaaggtt
tgggattcgagaaagttggaaaaggacatctcatttaggtcgaggctaacttatcacttg
gagggaagccgggcactgtgtgctgcaatgcttcggggctctgctcaagttattgttgga
gcatgtgatggcatgatacatatattttctgttgattacatttcgagaggtcttggcaat
gttgttgagaagtattcaggtattgctgatgtaaaaaagaaggatatcaaggaaggtgcc
atactcagccttctaaactactctgctgatagttgtttcagtcagatggtaatgtttagc
acccaaaattgtggaatccatctgtgggatacaagaaaaaactccagctcgtggacacta
aaagcaactcctgaggagggctacgtgtcttctttggtaacaggtccttgtgggaattgg
tttgtgtcaggatcttcaagaggcgtgcttaccctttgggatctgaggttccttgtacct
gtgaattcatggcactattctcttccatgcccgatagagaagatgtgtccttttattcct
ccttcaaatgcctctctgcctactactgcaagaccccttatttacgttgctgctggttgc
aatgaagtttctctttggaatgcagaaaatggaagctgccaccaggtattgcgagttgca
aactatgatactgatgctgaaatgtatgatgggccttgggccttggcaagaccgtcgagt
aagtcaaactctaaaccagatccgagacgaaatgtcaatccaaggtacagagttaatgaa
ctgaatgaacctccttcccgtcttcttggtatccgttcactgcttcccttacctgggggt
gatttgttaactggtggtactgacttgaagatacgtcgatggaatcattacagtcctgac
caaacttattgtatctgtgggccaaacttgaatggagttgggaatgatgatttctatgaa
gcaagatctagttttggtgtgcaagttgtgcaggagacaagaagacgacctttaactact
aagttgactgcaaaggcagttcttgcagctgctgccactgattctgctggttgccatcgc
gactccattctatctctggcttctgtcaagttgaaccagagactcttaatatcgggcagt
agagatggggctctcaaggtttggaagtga
DBGET
integrated database retrieval system
