Corylus avellana (European hazelnut): 132165524
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Entry
132165524 CDS
T09426
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132165524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132165524
03036 Chromosome and associated proteins [BR:
cave03036
]
132165524
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132165524
Coactivators
SAGA/TFTC/STAGA complex
132165524
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132165524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
132165524
NCBI-ProteinID:
XP_059432110
LinkDB
All DBs
Position
ca11:22408118..22414725
Genome browser
AA seq
944 aa
AA seq
DB search
MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQPSDSDNAALSQGSNHTSS
QSLPQWQNASQDQSSESQIEQDQRSAQQQEQTLSGMELKQHGSVIESQQQNTVPEELKHL
QMPQKKSQDDCQQGKGHPTSLQNPQTTEMQISEKIRTPIDEPDRRPSLEGESQYAKLQKM
SNQQATITEQASNPINRTKPGQVPFGVLLPVLQAQLDKDRAMQLQTIFAKLKKNEIPKEG
FVRLMRGIVGDHMLKLAVMKIQSQPSSNQFQLQSQASARQNPQRMPSVSASSTQFSDPHS
FAQLHQKGTDSSADPSHTAVVQMPADSSYPTIENDAQKTREVNRQSDSHGIQVSQVSSSS
ESTVNQEREQSSVTIQGLNKQQQQHLHFPPIYGSTGGNYHPYSGTNVNTSTSSVKPQPHD
TQLRQISQHQNLSSTQLGGTTQGMNMMSLPKFERHNSINDPKRVQAGSVSHLANNSTPQQ
NSVPWQSSSNKEQYSAPSSSMAGVKQEAIDQATEQQHKPHFSHPQGLSCFSSAQLVQGNA
TPGIVKDETLEKQSSRMGLSTSTSMIPSNLVSPSMTTQLDPNVPLGSRIPSTASPSVTNA
RTTSKKPSIGQKKPLEALGSSPTLPSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQ
LFSGPKEDSRVSEASRRVVQEEEERLILQKTPLQKKLAEIMTKCGLKSISNDVERCLSLC
VEERMRGLISNLIRLSRQRVDIEKPRHRTLITLDVRQQIMTMNRKAREEWEKKQAEAERL
RRLNEPEGNNGVEGEKEKDEGRAKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQL
MAEQARQKREGGVDASGSQPGKDVSRRLTSGRKDNQDVEKKGNAASAGAVRKVGRNQVIV
PQTKVARKISIKDVIAVLEREPQMSRSTLIYRLYERIHSDATVE
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccataatgaagctccttgaagaagatgaggacgagagtatgcattcaggg
gcggatgtggaggcattccaggctgccctaaatagagacataggcggagatgcatcaact
tctcagccctccgattcagataatgctgctttgtctcaaggaagcaatcatacttccagt
cagtcattaccacaatggcaaaatgctagccaagatcaaagcagtgaatctcaaattgaa
caagaccaaagaagtgcacagcagcaagaacaaactttatctggaatggagctaaagcaa
catggatctgttattgaaagtcagcaacagaatactgtcccggaggaactcaagcacctt
caaatgccacagaaaaaatcccaagatgattgtcaacaggggaaggggcatccaacttcc
ctccagaatcctcagacaactgaaatgcagatttctgaaaaaattcgtacaccaatagat
gagccagataggagacctagtctggaaggtgaatctcaatatgcgaaattacagaagatg
agtaatcaacaggcaacaatcacagagcaagcaagcaacccaataaatcgtactaaacca
gggcaagtaccatttggcgtattactgcccgttctacaagcccaacttgataaagataga
gccatgcaactccaaacaatatttgcaaaactcaagaaaaatgagatcccaaaagaaggg
tttgtccggctcatgagaggtattgtgggagatcatatgctcaaattggcagtaatgaaa
atacaatcacagccaagttccaatcaattccagttgcaatctcaagcttcagcacggcaa
aaccctcagcggatgccatctgttagtgccagttccacacaattcagtgatccccactca
tttgcacaacttcatcagaagggcaccgactcttctgcagacccttctcatactgctgtt
gtccaaatgccagctgattcaagctatccaaccatagaaaatgatgctcagaaaactcga
gaggtgaatcgccagtcagattctcatggaattcaagtaagccaagtatcttcttccagt
gagagcactgtcaatcaagaaagggagcaatcctcagttaccatacaaggtcttaacaag
cagcagcaacagcatttgcactttccacccatttatggaagtactggtggtaattatcat
ccatattctgggacaaatgtcaatacttcaacatcatctgtcaaaccacaacctcatgat
acacaattgaggcaaatttcacaacatcagaacttgagttccactcagttaggtggaaca
acacagggcatgaacatgatgagcttgcctaagtttgagaggcacaattctatcaatgat
ccaaagcgagttcaggctggatctgtctctcacttggcaaacaattcaaccccacaacag
aattcagttccttggcaatcgtcatcaaataaagaacaatattctgccccttcatcatca
atggctggtgtaaaacaggaagcaattgatcaggctactgagcagcagcacaaaccccat
ttttctcatccacaaggattgtcttgtttttcttctgcacagcttgtacagggaaatgca
acccctggaattgtaaaggatgaaactttagagaagcagtcttcgaggatgggtctttcg
acatccacaagcatgatcccttcgaatttagtttctccttctatgacaacacaattggat
cctaatgtcccattaggttctcggatcccatctaccgcctctccttctgtgactaatgca
aggacaacttccaaaaagccttctattggccagaagaaaccacttgaggcacttggttca
tcaccaactctgccaagtaaaaagcaaaaagtatctggggccttttcagatcaaagcatt
gaacaactcaatgatgtcactgcagtcagtggagttaatcttagggaagaggaggaacaa
ctattttctggacccaaggaggacagtcgagtttcagaagcatctcgaagagttgtgcaa
gaagaagaagagagactgattttgcagaaaactcccctccagaaaaaactggcagagatc
atgaccaaatgtggtttgaagagtataagcaatgatgtggagcgatgcttgtcattgtgt
gtggaggaaagaatgcgcggattaataagtaacctaatcagactgtcaagacagcgggtt
gatattgagaaaccaagacaccgtactcttatcaccttggatgttcgacaacaaatcatg
acaatgaacaggaaagctagggaggaatgggagaaaaaacaggctgaagcagagaggctc
cggagacttaatgaacccgagggtaataatggagttgagggagaaaaggagaaagatgaa
ggtcgtgctaaatcacttaaggcaaacaaagaggaggatgacaaaatgaggacaacagct
gcaaatgttgctgcccgtgctgctgttggaggagatgacatgttgtcaaaatggcaactt
atggctgagcaagcccggcagaaacgtgaaggaggggtggatgcatctggttctcagcca
ggtaaagatgtgagtcgcaggctgacatctggaagaaaggacaaccaagacgtagagaaa
aagggcaatgcagcttctgcaggggctgttagaaaagttgggaggaaccaagttattgtg
cctcaaacaaaggttgcgcgtaagatctccattaaggatgtgattgctgtcctggaaagg
gaaccccagatgtctaggtctacactgatatatcgcttgtatgagagaattcactcagat
gccaccgttgaatag
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