Corylus avellana (European hazelnut): 132165631
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Entry
132165631 CDS
T09426
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132165631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132165631
03110 Chaperones and folding catalysts [BR:
cave03110
]
132165631
03029 Mitochondrial biogenesis [BR:
cave03029
]
132165631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132165631
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132165631
Messenger RNA biogenesis [BR:
cave03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132165631
Chaperones and folding catalysts [BR:
cave03110
]
Heat shock proteins
HSP60 / Chaperonin
132165631
Mitochondrial biogenesis [BR:
cave03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132165631
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132165631
Exosomal proteins of other body fluids (saliva and urine)
132165631
Exosomal proteins of breast cancer cells
132165631
Exosomal proteins of colorectal cancer cells
132165631
Exosomal proteins of bladder cancer cells
132165631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
132165631
NCBI-ProteinID:
XP_059432255
LinkDB
All DBs
Position
ca11:2367517..2373891
Genome browser
AA seq
576 aa
AA seq
DB search
MYRFASGLASKARLAKNISNKIGSGSSWSRNYAAKDIKFGVDARALILRGVEELADAVKV
TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSVEFQDRVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMIKTSEEIAQVGT
ISANGDREIGQLIANAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPIILIHEKKISNLNAIVKVLELALKTQRPLLIIAEDVESDVLATLVLNKLRA
GIKVCAIKAPGFGENRKAGLQDLATLTGGEIITEELGLNLEKVGPEVFGSCKKVTVSKDD
TVILDGAGDKKAITERCEQLRSSIELSTSDYDKEKLEERLAKLSGGVAVLKIGGASETEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLETANFDQKIGVQIIKNALKM
PVYTIASNAGVEGAVVVGKLLEQNDPDQGYDAARGEYVNMIESGIIDPVKVIRTALVDAA
SVSSLLTTTEAVITELPKDEKETPAMGGGMGGGFGY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgccagtggccttgcctccaaagctaggttggctaagaacattagcaat
aagattggcagtggatcgagttggagccgaaactatgcagcgaaagacattaaattcggt
gtcgacgcacgtgcattgattcttaggggtgttgaagagcttgctgatgcagttaaagtg
acaatggggccgaaaggtcgcaacgttgttctggaacaaagttttggagcccctaaagtg
acgaaagatggggttactgtagcaaagagtgtggaattccaagacagagtcaaaaacatt
ggtgctagtcttgtaaaacaagttgcaaatgctacaaatgatgttgcaggcgatggcacc
acttgtgcgacagttctcactcgtgcgatatttgctgaaggatgcaagtcagtggcagct
ggaatgaatgccatggacctaagacgtggaatttcaatggcagttgactctgttgtgaca
aacttgaagagtagggcccggatgattaagacatctgaagaaatagcgcaggttggaaca
atatcagctaatggagatagagagattggtcagctaatagccaatgccatggagaaagtt
ggcaaagagggtgttattactatctctgacggaaagaccttgtataacgaattggaggtt
gttgagggaatgaagctggataggggttatatttccccttatttcatcactaatcagaag
aatcaaaaatgtgagctagaagatccaatcattttgatccatgaaaagaaaatctcaaac
ttaaatgctatagttaaagtattggagttggccttgaagacacaaaggcccttactgatt
attgctgaagatgtggaaagtgacgtgctagctactcttgttttgaacaagcttcgcgct
ggaatcaaggtttgtgccattaaagcccctgggtttggtgaaaacaggaaggctggtctg
caggaccttgccactctcacaggaggcgagataataactgaagagcttggtctcaacctt
gaaaaggtgggaccagaagtgtttggttcatgcaaaaaggttacggtatcaaaggatgat
actgtcattcttgatggagctggtgacaagaaagccatcacagaaagatgtgaacagctg
agatcctcgattgaattgagcacttccgattatgacaaggaaaagttagaggaacggctt
gcaaagctttctggcggtgttgctgttttaaagattggaggagctagcgaaacagaagtt
agtgagaagaaggatagagtaactgatgctctaaatgccaccaaggctgccgtagaggaa
gggattgtacctggtggcggtgttgcgcttctctatgcctcaaaggagctggacaagttg
gaaacagcaaactttgaccaaaagattggcgtacagattattaagaatgctcttaagatg
cctgtatacacaattgcttctaatgctggagttgagggggcagttgttgttggcaagctg
ttggagcaaaacgatcctgatcaaggatatgatgcagctagaggtgaatatgtaaatatg
atagagtcaggaattattgatcctgtgaaagtcattaggacagccttggttgatgctgct
agcgtatcgtcactgttgacgacaaccgaggcagttatcaccgagcttcccaaggatgag
aaggaaaccccagctatgggcggcggaatgggcggtggcttcggctattga
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