KEGG   Corylus avellana (European hazelnut): 132165668
Entry
132165668         CDS       T09426                                 
Name
(RefSeq) protein CHROMATIN REMODELING 8
  KO
K10841  DNA excision repair protein ERCC-6
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    132165668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cave03036]
    132165668
   03400 DNA repair and recombination proteins [BR:cave03400]
    132165668
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    132165668
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      132165668
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3
Other DBs
NCBI-GeneID: 132165668
NCBI-ProteinID: XP_059432305
LinkDB
Position
ca11:complement(1384260..1391161)
AA seq 1264 aa
MAEDEDRVLLSSLGITSANPEDIERDILAEVIRNDENGSEGGGSTEEEPLEKSESIDPSS
TSQAKLFHKLKVVEFEIDAVASTVGQVRNVASDGNDRGELGNQEDGGQVSPNGLNLQHAL
AADRLRSLKKTKAQLDKELSDLRKGNSSKAVEHDKVLRNLVKEEPKRKRKLKEVQKSRKN
VEKRQKIVSFEEDTGFDALLDAASSGFVETERDEFIRKGILTPFHKLKGFERRLQQPGSF
NRLDVPENEDETNNLVAASVARAVRSMSEAAQARPTTKLLDPEALPKLDAPTRPFQRLKT
PLKLPQSAKRELEKNDDSKRKKKNKRPLPNRKWTKLISCEEKHLEESEDARDEVVSSSCE
DVKPEGVKDVDDYEPPYVTLEGGLKIPESIFCALFDYQKVGVQWLWELHCQRAGGIMGDE
MGLGKTIQVLSFLGALHFSNMYKPSIIVCPVTLLRQWRREARKWYPSFHVVILHDSAQDP
INRKKQAKSYDSDYESEASFDSEYEGDISSRSNGKWDSLINRVLRSESGLLITTYEQLRI
LGEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTIHRIIMTGAPIQNKLAELWSLFD
FVFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADV
NAHLPKKTEHVLFCSLTAEQRSVYRAFLASTEVEQILDGNRNSLYGIDVMRKICNHPDLL
EREHSCHNPDYGNPERSGKMKVVDQVLKVWKEQGHRVLLFTQTQQMLDILEKFLITAGYC
YRRMDGLTPVKQRMALMDEFNNSNDVFIFILTTKVGGLGTNLTGADRVIIYDPDWNPSTD
MQARERAWRIGQKRDVTVYRLITSGAIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDM
KDLFVLNDNRENGSTETSNIFGQLSEDVNVVGAQKDKQDKQKPLEVPARHTDGVAAENDN
KSGIATSSGKGKEKADHSDGDVDEETGILRSLFGAHGIHSAMNHDVIMNAHDGEKMRLEE
QASQVAQRAAEALRQSRMLRSRDSISVPTWTGKSGTAGAPLSMRQKFGSTVNSQLTNNTK
SVNDLSSSGTNSISGIAAGASAGKALSSGELLARIRSTQERAVGAGLEQQLASSSHNDVP
RGGATLHGSEVYPTGMGTRSDPALENSSSSKKSSRNKARSADVGPSRPSKNKARVQPEVL
IRQICTFMQQRGGRTTSASIVQHFKERIPAEDLPLFKNLLKEIATLAKDLNESHWVLKPE
YLQK
NT seq 3795 nt   +upstreamnt  +downstreamnt
atggccgaagacgaggatagagttctgcttagtagtttgggtataacctccgcgaatcct
gaggatatcgagcgtgacattctagcagaggtaataaggaatgatgagaatggtagcgaa
ggtggagggagcacggaggaggaacctctcgagaagtcggaaagtattgacccatcatcc
acgagccaagcaaaactcttccataaattgaaggtagtagagtttgaaatagatgccgtt
gcctccactgttgggcaggtgaggaatgttgcaagtgatggtaatgacagaggggagctt
ggaaatcaagaggatggtggtcaagtttcccctaatggcttaaatcttcagcatgccttg
gctgctgatcggcttcgaagcctcaagaaaaccaaggctcaacttgacaaagaactttca
gatttgcgcaagggtaactcttccaaagctgttgaacatgacaaggtgttacgaaatctg
gtcaaggaagagccaaaacgcaagaggaagttaaaagaggttcagaaatcgaggaaaaat
gtggaaaagagacagaaaatagtctcatttgaggaggatactggttttgatgcacttttg
gatgcagcatcttcaggctttgttgaaacagaaagggatgaattcattcggaaaggaatt
ttaactccttttcataagctgaagggttttgagcgccgtcttcaacaaccagggtcattt
aataggctcgatgtacctgagaatgaagatgagactaataatcttgttgctgcaagtgtt
gccagagctgtacggtcaatgtcagaggctgctcaagctcgcccaacaaccaaactcctt
gatccagaagctttgccaaagcttgatgcacctactcgtccttttcaaaggctgaaaaca
cctttaaaacttcctcaatccgcaaaacgagagctagaaaagaatgatgattcaaaaagg
aaaaagaaaaacaaacggcctttgcctaacaggaagtggacaaagctcatttcttgtgag
gaaaagcacttggaagaaagtgaggatgcaagggatgaagtagtaagctccagttgtgaa
gatgtgaagccagagggtgttaaagacgtggatgattatgaacctccttatgtaacactt
gaaggtgggctgaaaataccagaaagcatcttttgcgcactttttgactatcaaaaagtg
ggagtacagtggttgtgggaattgcattgccaaagagcaggtgggattatgggagatgag
atgggtcttggtaagactatccaagtcttatcttttcttggtgcactgcatttcagtaat
atgtacaaaccgagcattattgtctgccctgttacactcttgcgacagtggagaagggaa
gcacgaaaatggtacccaagctttcatgtggtgatactacatgattctgctcaggatcct
attaataggaagaagcaagccaaatcttatgatagtgattatgaaagcgaagcttcattt
gacagtgaatatgagggagacatctcgtctaggagcaatggaaaatgggattccttgata
aaccgtgttttgagatcagaatctgggttgcttatcaccacttatgagcaactgcgcata
ttaggtgaaaaattgcttgatattgaatggggttatgcagttttggatgaaggacaccga
attcggaatccgaatgctgagattactctagtttgcaagcagctacagacaattcatcga
ataataatgactggtgctccaattcagaacaagctggctgaactgtggtctttatttgat
tttgttttccctgggaagctgggtgtcttgcctgtatttgaggcagagtttgcagtcccc
atatctgttggtggttatgctaatgcttcaccattgcaagtatccacagcttacaggtgt
gctgtggtcctgcgtgacttaatcatgccttatctcctacgacgtatgaaggctgatgtg
aatgcccaccttccaaagaagaccgaacatgtcctcttttgcagcctcactgcagagcaa
cgatctgtgtatagagcttttctagctagcactgaggtagaacagattttagatggcaat
agaaattctctttacggaattgatgtgatgcgtaagatttgcaatcaccctgatctgctt
gagagggagcattcctgccacaatccagactatgggaatccagaacgcagtggaaaaatg
aaagtagttgaccaagtgcttaaggtttggaaggaacaaggtcatcgtgttcttcttttt
acacaaactcaacaaatgcttgatattcttgagaagtttttgattaccgctggctactgc
tacaggagaatggatggtcttactcccgtaaaacaaagaatggccttaatggatgaattt
aataactcaaatgatgtctttatcttcattttaacgaccaaggttggtggtttgggaaca
aatctaactggtgcagaccgggtgatcatctacgatcctgactggaacccttcaactgac
atgcaggccagggagcgtgcttggcgtattggtcagaaacgggacgtaacagtgtataga
ttgatcacaagtggagcgatagaggagaaggtgtaccaccggcagatttacaaacatttt
ctcactaataagattttgaagaacccacagcagagaaggttctttaaagctcgggatatg
aaggatcttttcgtcctgaatgacaacagagagaatgggtcaactgaaacatctaatatt
ttcggtcaactttctgaagatgtaaacgttgttggggctcagaaagataaacaggataag
caaaaacctcttgaagttcctgcacgacatactgatggtgttgcagctgaaaatgataac
aaatcagggattgcaacttcgagcgggaaagggaaagaaaaagctgatcacagtgatggt
gatgtagatgaagaaacaggcattttaaggagtctttttggtgcccatgggatacatagt
gccatgaaccatgatgtaatcatgaacgcccatgatggggagaagatgaggcttgaggag
caagcttcccaagttgcacaaagagcagcagaagcattgcgccagtcacggatgctccgt
agtcgtgacagtatttctgtcccaacatggaccgggaaatccgggactgctggtgcacca
ttatctatgcgtcagaagttcggttcaactgtgaactctcagttgacaaataataccaaa
tcggtcaatgacttgtccagcagtggaaccaacagtataagtggaattgcagctggggca
tccgcagggaaggcactatcttcaggcgaactattagctagaatacgaagtacccaagaa
agagctgttggtgctggacttgaacaacagttggcttcaagttctcataacgatgttccg
cgtggaggggccactctgcatggatccgaggtttatccgacagggatgggtacacgaagt
gatcctgccttggagaattcctcatcatcaaaaaaaagttctcgtaacaaggcaagatcc
gctgatgttgggccttctagaccatcaaagaacaaagctagagtgcagccggaagttttg
atacgccagatctgtacatttatgcaacaaagaggtggaagaaccacttcagccagcata
gtgcagcacttcaaagagaggatacccgccgaggatctacccttgtttaagaatcttttg
aaggaaatagcaacactagcgaaagacctgaatgaatcgcattgggttctaaaaccagag
tatctacagaaataa

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