Corylus avellana (European hazelnut): 132165772
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Entry
132165772 CDS
T09426
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
cave03410
Base excision repair
cave03420
Nucleotide excision repair
cave03430
Mismatch repair
cave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132165772
03410 Base excision repair
132165772
03420 Nucleotide excision repair
132165772
03430 Mismatch repair
132165772
03440 Homologous recombination
132165772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132165772
03400 DNA repair and recombination proteins [BR:
cave03400
]
132165772
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132165772
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
132165772
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
132165772
MMR (mismatch excision repair)
DNA polymerase delta complex
132165772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
132165772
NCBI-ProteinID:
XP_059432438
LinkDB
All DBs
Position
ca11:complement(9938119..9955911)
Genome browser
AA seq
1086 aa
AA seq
DB search
MSKNGNPRKRPAPPQKTSPAQAPKHQAASQEDEFVDEDVFLDETLILEEEILRDIEDRQA
LACRLAKWVRPPLSDDYVSQSRSILFQQLEIDYVIGESHKELLPNSSGPAAIIRIFGVTR
EGHSVCCNVHGFEPYFYISCPPGMGPDDISRFHQILEARMREVNRNGKVPKYVRRIELVQ
KRSVMYYQQQTSHPFLKIVVALPTMVTSCRGILDRGIQMDGFGVKSFMTYESNVLFALRF
MIDRKIVGGNWIEVLAGKYKKTSKNLSYCQLEFDCLYSELISHAPEGEFSKMAPFRILSF
DIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQPFIRNVMTLKSCSPIVGVDVMSFDTER
DVLLAWRNFIREVDPDIIIGYNICKFDLPYLIERAETLGIAEFPILGRIRNSRVRVKDTT
FSSRQMGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIIS
DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKV
LSQLLRKARQRDLVIPNVKQAGSEQGTYEGATVLEAKAGFYEKPIATLDFASLYPSIMMA
YNLCYCTLVTPEDVRKLNLPPECINKTPSGETFVKSNLQKGILPEILEELIAARKRAKAD
LKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKK
LVEDKFTMIGGYEHNVEVIYGDTDSVMVQFGVDNVEAAMNLGREAAEYISGTFIKPIKLE
FEKVYYPYLLISKKRYAGLLWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTESLHKILID
RDIPGAIQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAAT
APNVGDRVPYVIVKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQMSKPLLRIFEPIL
KNASRELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALISDKDRILCSHCKGREAE
LYCKTVANVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQ
LDRWSF
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaacggcaatccccggaaacgcccagcgccgccgcagaaaacctcgccggca
caagcccccaagcaccaggcggcgtctcaagaagacgagttcgtggatgaggacgtcttc
ctggacgaaaccctcatcctggaggaggagatcctccgtgacatcgaggatcgccaggcc
ctcgcgtgccgccttgccaagtgggttcgccctcccctctccgacgactacgtgtcgcag
tctcggagcatcctttttcagcaattggagattgattatgtgatcggggagagtcacaaa
gaattgttgcccaattcttctggacctgccgccattatccgcattttcggggttactagg
gaaggacatagtgtttgctgcaatgttcatgggtttgagccatatttttacataagctgc
cctccgggaatgggccctgatgatatctcccgtttccatcaaattcttgaggcaaggatg
agagaggtgaatcggaatggtaaggtacccaaatatgtccgtcgtattgaattggtgcag
aaaaggagtgtcatgtattaccagcagcagacttctcatccgtttctcaaaattgtagtt
gcattgccgacaatggtaaccagctgcagaggaattcttgatagaggcattcaaatggac
ggttttggtgtgaagagcttcatgacatatgaaagcaatgttctctttgctcttcgtttt
atgattgaccgcaaaattgttggtggcaattggattgaagtactggctggaaaatataag
aagacctcaaagaatttgtcctactgccaattagaatttgattgcctgtattcagaactg
attagccatgccccagaaggggaattctcaaagatggctccatttcgcatattgagtttt
gacattgagtgtgctggtcgtaaaggtcattttccggagcctacccatgatcctgttatc
caggtggcaaatctagttactttgcagggagaggaccagccatttattcgcaacgtgatg
acccttaagtcatgctctccgatagttggtgtcgatgtgatgtcttttgatacagaaaga
gacgtcttgctagcgtggaggaattttatccgtgaagtggaccctgatatcataattgga
tataacatatgcaaatttgatttgccatatctaattgagagggctgagaccttgggaatt
gctgaatttccaatactgggccgcatcaggaatagcagagttcgggtcaaggatacaact
ttttcttcaagacagatgggaacaagggaaagtaaagaagtaacagtagaagggagagtt
caatttgatttgctccaggttatgcaacgagattataagttaagttcttattccttgaat
tctgtctcagcacacttcctctctgagcagaaagaggatgtacaccattcaataatatct
gatcttcagaatgggaatgccgaaacaaggaggcggcttgctgtatattgtctgaaggat
gcttatctcccacagcggcttttagacaaactgatgttcatctacaattacgtggagatg
gctcgagtaacaggtgttcctatctcttttcttctttccagagggcaaagcatcaaggta
ctttctcaacttcttaggaaggcaagacaaagggaccttgttattccaaatgtcaaacag
gcaggatctgaacaaggaacatatgaaggtgctactgttttggaggcaaaggcaggattt
tatgaaaagccaattgcaacattggattttgcatccttgtatccatctattatgatggca
tataatttatgctactgcactctggtgacacctgaggatgttcgaaaactcaacctgccc
ccagaatgcatcaacaaaaccccatctggcgaaacatttgttaaatcaaatttgcagaag
ggaatacttcctgaaattcttgaagaactaatagcagctcgtaagagagcaaaagcagat
ttgaaggaagcaaaagatccacttgagaaggctgtgctagatggtcgacagctggccttg
aaaataagtgcaaattctgtttacggatttacaggagctactgttggccagttaccatgc
ttagagatatcttcaagtgttacaagctatggtcgacaaatgattgagcataccaaaaaa
cttgtggaagataaatttacgatgattgggggctatgaacacaatgttgaggttatatat
ggagacacagattctgttatggtacaattcggtgtcgacaacgtggaagcagccatgaac
ttggggagagaggctgctgaatatattagtggaactttcattaaaccaatcaaactcgag
tttgagaaggtttattatccatatcttctgatcagcaagaagagatatgctggtttgcta
tggacaaatccagaaaagtttgacaaaatggacactaaaggtattgaaacagttcgtaga
gacaattgtttgttggttaaaaacctggtaactgagtccctgcacaaaatacttattgac
cgggacattcctggggcaatccagtatgtcaagaataccatttcagatcttcttatgaac
cgcatggatttgtcacttttggttattactaagggtctgacaaagacaggagatgattac
gaagtaaaggcagctcacgttgaacttgctgagcgcatgcgcaagcgagatgctgctact
gctccaaatgttggggatcgggtaccttatgtcatcgttaaagctgcaaaaggtgccaag
gcttatgagaagtcagaggatcccatctatgtcctagagaataacataccaatagacccc
caatactaccttgaaaatcaaatgagcaagccacttctaagaatttttgagcccattttg
aagaatgctagcagggaactactccatggaagtcacacaagatctatttctatctctact
ccctcaaacagtggcataatgaaatttgcaaagaagcaactcagctgcattggctgcaaa
gctctaattagtgataaagatcgaattctctgctcacactgtaaaggaagagaagccgaa
ctttactgcaaaacagtggctaatgtatctgagctagagatgctttttgggaggctgtgg
acacagtgtcaagagtgccaaggctctctacatcaggatgtgctctgcacaagtcgagat
tgtccaatattttatcgaagaaagaaggcacagaaagacatggctgaagccaagctgcaa
ttagaccggtggagcttctaa
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integrated database retrieval system
