Corylus avellana (European hazelnut): 132166376
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Entry
132166376 CDS
T09426
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132166376
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cave01007
]
132166376
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cave03016
]
132166376
Enzymes [BR:
cave01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
132166376
Amino acid related enzymes [BR:
cave01007
]
Aminoacyl-tRNA synthetase
Class II (U)
132166376
Transfer RNA biogenesis [BR:
cave03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132166376
Prokaryotic type
132166376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
tRNA-synt_2d
DUF2740
Motif
Other DBs
NCBI-GeneID:
132166376
NCBI-ProteinID:
XP_059433162
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Position
ca11:11077961..11142687
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AA seq
601 aa
AA seq
DB search
MPTVSVGRDRLFAALGKTYTQEEFEDLCFRFGIELDDVTTEKAIIRKEKHLEEEEADEDE
EVIYKIEVPANRYDLLCLEGIAQALRVFNGKQEIPTYKVANISRESMIKMHVKPETSSIR
PYVVCAVLRGITFDEGSYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLHRPFTYEALPP
SNINFVPLKQVKNFRADELMEFYKSDLKLKKFLHIIENSPVYPVIYDHNRTVLSLPPIIN
SAHSAITLKTKNVFIECTATDLTKAKIVLNTVVTTFSEYCERKFEIEPVEVIYSDGKSYT
YPELSVYNMGVSLSYITGAIGVPLEAEKVTSLLNRMQLHAEQSVSGDRSTINVSVPPTRS
DVLHPCDVMEDVAIAYGYNNIKDIAVAKGYNISKGRAVSLKPLRLEEFSHLIRLEMAMCG
FTEVLSFILCSLGDNFAMINHEDDGSTAVIIENPRSSENETARTNLMSGILKTVGQNKAH
PKPIKIFEVGDVVLLDETKDVGATNRRQLAALYCGATAGYEIIHGLVERIMQVIGLVPPD
DITTYYLKPSNEPEFLRGTQASIVYKGKQVGTSGIVHPEVLSKFDIPDPCSYFELNIQCF
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcagcgtgggaagggatcgtctgtttgcagccctaggcaaaacctacacg
caggaagagttcgaggacctttgcttcaggtttggaatcgagctcgacgacgtgactact
gagaaagcgattattagaaaggaaaagcatttggaagaagaagaagctgacgaagatgaa
gaagttatctacaaaattgaagtccctgccaatagatatgatttgctttgccttgaaggg
attgctcaagctcttcgagtcttcaatgggaagcaggagataccgacatataaagtggct
aacattagcagagaatcaatgattaaaatgcatgtgaaaccagagacgtcttcaattcgt
ccctatgttgtttgtgctgttttgaggggtataacatttgatgaaggaagttataacagc
tttattgatctccaagataagctccatcagaacatttgtcggcgaagaaccctagttgct
attgggactcatgacttagatacattacatcgccctttcacatatgaggcattgccacct
tcaaatataaattttgtgccactgaagcaggtgaagaacttcagagctgatgagctaatg
gagttttataaatcagatttgaaactcaagaagtttttgcacataattgagaactcacca
gtgtaccctgttatatatgaccataacagaactgttttgtctttaccccccattatcaat
agtgcacactcagcaatcactctaaagacaaagaatgtattcattgaatgcactgccact
gatctaacaaaagccaagattgttttgaacacagtggtgacaaccttttcagaatattgt
gaaagaaagtttgaaattgaaccagttgaagtgatatattctgatgggaagtcgtatact
tatcctgaattatctgtctacaatatgggggtttctctatcttatattacgggtgcaatt
ggagtccccttggaggctgagaaggtcacgagtttgttaaatcggatgcaattgcatgct
gagcagtctgtatcaggtgatagatccactattaatgtatctgtaccccctactagaagt
gatgttcttcatccatgtgatgttatggaggatgttgctattgcttatggctacaacaat
attaaggatattgcagttgctaagggttacaatatttcgaagggaagggctgtgtctttg
aagccattgcgcttggaagagtttagtcatcttatcagattggagatggcaatgtgcggg
tttacagaagtcttgtcatttattttgtgctcgcttggtgataattttgcaatgataaat
catgaagatgacggatcaactgcagtgattattgaaaatcctcgttcctctgaaaatgag
accgctcgtaccaatcttatgtctggtatattgaaaactgttggacagaacaaagcccat
ccaaagcccataaagatttttgaagtgggtgacgtagtgctcttggatgagacaaaagat
gtgggtgcaacaaatcgtcgccaacttgctgctctatattgtggtgctactgcaggatat
gagataattcatggcctggtggaaagaatcatgcaagtgattgggcttgttccacctgat
gacattacaacatactatctaaagccttcaaatgaacctgagtttcttcggggcacacaa
gctagcatcgtttacaaagggaagcaagtaggaacttctggaattgtgcaccctgaggtc
ttgagcaaatttgacattccggatccttgctcctattttgaactcaacattcagtgcttt
ttgtag
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