Corylus avellana (European hazelnut): 132166496
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Entry
132166496 CDS
T09426
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
KO
K12819
pre-mRNA-processing factor SLU7
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132166496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132166496
Spliceosome [BR:
cave03041
]
Complex C
Other components
Step II factors
132166496
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
132166496
NCBI-ProteinID:
XP_059433303
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Position
ca11:complement(1200014..1204136)
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AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIYQADKYRKGACENCGAMTHDSKSCMDRPRKVGAKW
TNKHIAPDEKIETFELDYDGKRDRWNGYDASTYAYVIERYEARDEARRKYLKDQQLKKLE
EKNNNQNDEAGVSDEDEEEDGLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPMPDADPNEKFYGGDNQHRDSGEALEFKQLNI
HSWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKFQTKDTILEKYGNAAAEEELPMEL
LLGQSERQVEYDRAGRIIKGQEKALPRSKYEEDVYINNHTYVWGSWWKDHQWGYKCCKQM
IRNSYCTGAAGIEAAEAATDLMKANIARKEATEELPPPVEAKRLASWGTDVPDDLVLDDK
LLAEALKKEDERRREEKDDRKRKYNVRYNDEVTLEDMEAYRMKKVHHDDPMRDFLN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcttcagttgcatttaagtctagggaggaccatagaaagcaaattgagttg
gaagaagcacgtaaagctgggcttgctcctgctgaggttgacgaggatggaaaagagatc
aaccctcatattccccagtatatgtcatctgcaccttggtatctcaatgctgagagacct
agtttaaaacatcaaaggaagtggaaatcagatccgaattacacaaaatcgtggtatgac
agaggtgcaaagatttaccaggctgacaaatacaggaagggtgcatgtgaaaactgtgga
gctatgacacacgattcaaagtcatgcatggatagaccccggaaagtgggagcaaaatgg
acgaacaaacacattgcacctgatgaaaagatagagacatttgagcttgactatgatgga
aaacgggaccggtggaatggctatgatgcatccacctatgcctatgtcattgagagatat
gaagcaagagatgaagctcgaaggaaatacctgaaagaccaacagcttaagaaacttgag
gagaaaaacaataaccaaaatgatgaggctggggtaagtgatgaggatgaagaagaagat
ggtctaagggtagatgaagccaaggttgacgagagcaaacaaatggattttgcaaaggtt
gaaaagcgtgtacgtacaacaggtggtggaagcaccggaactgtgaggaacttgcgtatt
cgggaggacacggcaaaatatcttttaaatcttgatgtcaactctgcacattacgatccc
aaaacccggtccatgcgtgaagatcctatgccagatgcagatcctaatgagaagttctat
gggggagataatcaacatagagatagtggtgaagctttggagttcaagcaacttaacatc
cattcttgggaagcatttgacaagggacaagacattcacatgcaagcagctccgtcccaa
gccgagttgctttataagaattataaggtcatcaaggagaaattgaaattccaaacaaag
gacaccatcttggagaagtatggcaatgcagctgctgaagaagaacttccaatggagctt
ctactcggacaaagtgaaagacaagttgaatatgatcgtgctggaaggataataaagggg
caggagaaggcacttccaagaagcaaatatgaagaagatgtatacattaacaaccacaca
tatgtttggggttcgtggtggaaggatcatcagtggggctacaagtgctgcaagcagatg
atccgaaatagctattgcactggtgccgccggaatagaagctgctgaggctgcaacagat
cttatgaaggctaatattgctcgtaaggaagctactgaagagttgcctccgccagtggag
gccaaaaggctagcttcttggggaactgatgtccctgatgatctggttttggatgacaag
ttacttgctgaggcacttaaaaaggaggatgaaaggagaagagaagagaaagatgataga
aaaaggaagtataacgtcagatataatgacgaggttaccctggaagatatggaagcttac
aggatgaagaaggtccaccatgacgatccgatgagggatttcttaaattaa
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