Corylus avellana (European hazelnut): 132166990
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Entry
132166990 CDS
T09426
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
cave04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132166990
04120 Ubiquitin mediated proteolysis
132166990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132166990
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132166990
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132166990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Spc24
NLP40
Motif
Other DBs
NCBI-GeneID:
132166990
NCBI-ProteinID:
XP_059433855
UniProt:
A0ACM5JQC5
LinkDB
All DBs
Position
ca1
Genome browser
AA seq
555 aa
AA seq
DB search
MMRLQTYAGLSLIATLAVIYHAFNSRGQFYPATVYLSTSKISLVLLLNMGLVIMCILWQL
TKRVFLGPLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFMGFLLLLDSLFLYSNIKHLLATKHASVSLFFSFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSTAAGHGSRPDVNQMGTGTG
STSAQGSVGTGVAGDNLSQHQVRLQAAAAAASIYEKSYVYPSANTLVWSPGYAILPKVQG
NLADSSNAESSGERASVVQPQQFAISGGPANLSFPQFPHTVFVPFQAPGANVTNGERFGS
DLNIPDSQLEAQKQFLRQQIEALQNQLHTLQKPKVEENKDKGPSTPSDSKGKTVASASSS
VSDCGRHGENDEVDT
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcagacgtatgctgggcttagtttaattgcgactctagcggttatttat
catgcttttaacagtagaggccagttctacccggccacggtttatttatcgacctctaag
atcagtttggtgcttcttctcaacatgggtctggtcattatgtgcatcttgtggcaattg
accaaacgggtattccttggtccccttcgggaagcagaggttgagaggctaaatgagcag
tcgtggagggaggttatggaaatcctatttgcaatcactattttccggcaggacttttca
gttacgtttcttgctatggtcacggctctcttgttaatcaaggctttgcattggttggct
cagaagagggttgagtatattgagaccactccatcagtacccatgttgtctcacattcgg
attgtttcttttatggggttcctccttctcctagatagtctctttttatacagtaatata
aagcatttgctagcgacaaagcatgcttctgtttcactcttcttttcatttgagtacatg
atactggctacaacaactgtgtcgacgtttgtgaaatatgtgttctatgttagtgacatg
cttatggagggacagtgggaaaggaagcctgtctacacattttacttggaacttatcagg
gacttgcttcatttgtctatgtatctgtgcttcttcctcgtgatctttatgaactatggt
gttcctttgcacttaatacgagagctttatgagacatttaggaattttaagattcgtgtt
gctgattacattcgttatcgaaagatcacttcaaacatgaatgatcgatttcccgatgca
acaccagaagaacttaatgcaagtgatgcaacctgcattatttgtcgcgaagagatgacg
acggccaagaaactaatttgtgggcatctatttcatgtgcattgtctccgatcatggtta
gagcgacaacatacttgtcctacttgcagagccctagttgtaccacctgaaaatgggaca
agtacagctgcagggcatggatcacggccagatgttaatcagatggggacaggcacagga
agtacatctgctcagggttctgttggtactggtgtggcaggtgataatttgagccagcat
caagtcagactccaagctgctgctgcagccgcctcaatatatgagaaatcttatgtttat
ccatctgcaaatacactagtatggtcccctggatatgccatacttcctaaggttcaagga
aatttggctgattctagtaatgcagaatctagtggagaacgagcttctgttgtacaacca
caacagtttgcaatctctggtggacctgcaaacttgtcctttcctcaatttccacacact
gtttttgttcctttccaggcgcctggagccaatgtgaccaacggagagaggtttggcagc
gatctaaatataccagactcacagctggaagctcagaaacaatttcttagacagcagatt
gaggccctgcaaaatcagctccacaccctacagaagccgaaagtggaggaaaacaaggac
aagggtccctcaacaccatcggatagtaaaggaaagactgttgcatctgcatcttcatct
gtttcggactgtggtcgtcatggggagaatgacgaggttgacacataa
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