Corylus avellana (European hazelnut): 132167326
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Entry
132167326 CDS
T09426
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00450
Selenocompound metabolism
cave00970
Aminoacyl-tRNA biosynthesis
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
132167326
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132167326
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cave01007
]
132167326
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cave03016
]
132167326
Enzymes [BR:
cave01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
132167326
Amino acid related enzymes [BR:
cave01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132167326
Transfer RNA biogenesis [BR:
cave03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132167326
Prokaryotic type
Other AARSs
132167326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
CoV_peptidase
Anticodon_1
DUF3952
Motif
Other DBs
NCBI-GeneID:
132167326
NCBI-ProteinID:
XP_059434250
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All DBs
Position
ca1:complement(50478500..50487089)
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AA seq
817 aa
AA seq
DB search
MGDARNDVAGERKAQKLPIEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLR
GYNAIYMCGTDEYGTATETKAMEENCTPKEICDKYHAIHKEVYDWFNISFDNFGRTSTPQ
QTEVCQAIFKKLLENNWLTENTMQQLYCDTCKRFLADRLVEGICPNEGCDYKSARGDQCE
KCSRLLNPTELKDPRCKVCQKTPRIRDTNHLFLELPLLKDKLEEYINKMSVAGSWSQNAI
HATYAWLKEGLKSRCITRDLKWGVPVPHENFSDKVFYVWFDAPIGYVSITSCYTPEWEKW
WKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKG
IGVFGNDAKDTNIPVEVWRYYLLNNRPEVSDTLFTWTDLQAKLNSELLSNLGNFINRVLS
FIAKPPGQGYGSIIPEPSDADPDPLKHEPTKKLVGSIVEYVEQYVEAMEKVKLKQGLKTA
MSISGEGNAYLQESQFWKLYKEDQPSCSLVIRTSAGLVYLLACLLEPFMPSFSLEVLKQL
NLPPEVPFSLEKGDIDRASRPWEILPAGHKIGTPEPLFKELKDEEVEFFREKFAGSQADR
IVRAEAEAEKIAEQLKKTKVSVRALFVTDSSGKRQRPTKSANEAKSKATAEPEISVTRLD
IRVGLITSAKKHPDADSLYVEEIDVGEGQPRTVVSGLVKYIPLEEMQQRKVCVLCNLKPA
TMRGIKSQAMVLAASSSDHTKVELVEPPQSARVGERVTFPGIDGEPDDVLNPKKKVWETV
QVDLNTNSELVACYKDVPFTTSAGICRVSSISSGSIR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgccaggaacgacgtcgcaggggagcggaaggcccagaagcttccgatcgaa
ggcaagcggaacatcctcatcaccagcgccttgccttacgtcaacaacgtcccacatctc
ggcaacatcatcggctgtgtgctgagtgctgatgtgtttgctcggtactgccggcttcgg
ggctacaatgcgatatacatgtgtggaacagatgagtacggaacggccacagaaaccaag
gccatggaagagaattgcacgcctaaagagatttgcgacaaataccatgcgattcataag
gaagtctatgattggttcaatataagttttgataactttggacgtacgtcaaccccacag
cagactgaagtttgccaagcaatttttaagaaactgttggagaataattggcttactgag
aacacaatgcagcaactttactgtgatacatgcaaaaggttcttagctgaccggcttgtg
gagggtatttgcccaaatgaggggtgtgattacaagtctgcacgaggtgatcaatgtgaa
aagtgcagtaggcttttgaatccaacagaattgaaagatcctaggtgcaaggtctgtcag
aaaacaccacgcattcgtgatacaaatcacttgtttcttgaactacctttgctgaaggac
aaattggaggaatacatcaacaaaatgtctgtggctggatcttggagccagaatgctatt
catgcaacatatgcatggcttaaagaagggctgaaatcacgatgtattaccagggacctg
aagtggggagttccagttccacatgagaattttagtgacaaggttttctatgtctggttt
gatgcccctataggatatgtctccatcacttcttgctacacacctgagtgggagaaatgg
tggaagaatcctgaaaatgtggagctgtatcagtttatgggcaaggataatgtgccgttc
cacactgtgatgtttccatctacgcttcttggaactggtgaaaactggactttaatgaag
accatcagtgtcactgaatacttgaactatgaagcaggaaagttttctaagagtaaaggt
attggagtttttggcaatgatgcaaaagatacaaacattcctgtggaagtatggagatat
tacttgctaaataataggcctgaggtatcggacacattatttacgtggactgatttgcaa
gcaaaattaaacagcgagttgctaagtaacttgggcaactttataaatcgagttttgagt
ttcattgctaaacctccaggtcaaggatatggttccattattcctgagccttcagatgct
gacccagatccgttgaaacatgaaccaacaaagaaattggttggtagcattgttgagtat
gtggagcaatatgtagaagccatggaaaaggttaaactaaagcaaggactgaaaactgca
atgagcatttctggtgaggggaatgcatatctgcaagaaagccaattctggaaactttac
aaggaagaccaaccttcctgttctctcgttataagaacttcggcagggctcgtatatcta
cttgcatgtttgctagaaccttttatgccttctttctctcttgaggttcttaagcagctc
aatttgcctcctgaagttccattttcacttgaaaaaggagatattgatagggcaagcaga
ccttgggagatcctgccagctggtcataaaattgggacaccagagccactgttcaaagaa
ttgaaagatgaagaagtagaatttttcagagagaagtttgcaggaagtcaagctgatagg
atcgtaagggcagaagcggaagcagagaagattgcagagcaactgaagaaaacaaaagtt
tcagtaagggcattatttgtaacagatagcagtggcaaaaggcaacggcctacgaaatct
gcaaatgaagccaaatctaaggccactgctgagccagaaatttctgttacaagacttgac
atccgcgttggccttattacaagcgctaagaagcatcctgatgctgattcgctctatgtg
gaagagattgatgtgggtgaaggacagccccgaaccgttgttagtggactcgtcaagtat
atacctcttgaagaaatgcagcaaaggaaggtgtgcgttctttgcaacctgaagccagca
accatgcggggtataaagtcacaagcaatggttcttgctgcttccagcagtgatcatacc
aaggttgaattagttgagccacctcaatctgctcgtgttggagaaagagtcacatttcct
gggatcgatggtgagcctgatgatgtcttaaaccctaaaaagaaggtctgggaaacagtg
caagttgatctgaacactaactcggaactagttgcctgctacaaagatgttccattcacc
acatcagctggtatttgcagggtttcatccatttccagtgggtcaatcaggtag
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