Corylus avellana (European hazelnut): 132167419
Help
Entry
132167419 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132167419
04121 Ubiquitin system [BR:
cave04121
]
132167419
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132167419
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132167419
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132167419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-Nse
zf-C3HC4_3
DUF7560
Motif
Other DBs
NCBI-GeneID:
132167419
NCBI-ProteinID:
XP_059434370
LinkDB
All DBs
Position
ca1:complement(5189029..5192267)
Genome browser
AA seq
338 aa
AA seq
DB search
MSLSPPRVRNNGAPRTYPLHWCYQCHRTVRVYSTNPSDIVCPRCFGQFISEIDTTRPRLV
VDFTDFDPSPEARLLEALSLMLDPPIRRFNHVAHNPETEFPDRPWFPQLRSRLDPETETG
AQRRSRRSRRSLDGRESSDPEPGIHGRPRTWIVLRPLDPFRPILHPENPVPPRVDPRNYF
LGPGLNEFIEQLTQNDRPGPPPLPDSAINTIPTVKVMADHLTNDSHCPVCKEEFKVGGEA
RELPCKHIYHSECIVPWLRLHNSCPVCRHELPAPCQEDARENDSETEHIHVRESSRRWCW
RCLRLNQLSSMWPFRARYRPVNLHGDHEHVGTSRSGLS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgagccctcctcgagtccgaaacaatggcgctcccaggacctacccgctccac
tggtgctaccagtgccaccgtacggtcagggtctactccacaaacccatcggacatcgtt
tgcccacgttgtttcgggcagttcataagtgagattgacacaaccaggcctaggctcgtt
gttgatttcaccgatttcgatccctccccggaagcccgtttactcgaggccctttctctc
atgctcgaccctccaatcaggcgcttcaatcatgtcgcgcacaacccggaaacagaattt
cccgaccgtccctggttcccgcagctgagaagtcgtctggacccagaaaccgaaactgga
gcccagcggcgttcaaggcggtcgcgccgcagtttggatgggagagagagctcggaccca
gaacctggaattcatggccggccacgtacttggattgttcttagacctctggatcctttc
agacccattttacaccctgaaaatccagtaccgccacgggttgatcctagaaactacttt
ctcgggccgggcctaaacgaatttatcgagcaactgactcaaaatgaccggccggggccg
cctcctttacccgattcggcaatcaacacaataccaaccgtgaaagtcatggcggaccac
ctgaccaacgactcgcattgccccgtgtgcaaggaggagttcaaggttggtggggaagcg
agggaattgccttgcaagcatatataccactctgaatgcattgttccttggctgcggctt
cacaattcttgtccggtttgccggcacgagctgcccgcaccttgtcaagaagatgctcga
gaaaatgactctgagactgagcatattcatgttagagagagcagcagacgctggtgctgg
aggtgcttgagattgaaccaattgtcctctatgtggcccttccgtgcaagataccgaccg
gtaaatctacacggtgatcatgaacatgtcggtacttctcgaagtggattaagctga
DBGET
integrated database retrieval system
