Corylus avellana (European hazelnut): 132167456
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Entry
132167456 CDS
T09426
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132167456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132167456
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132167456
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
132167456
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132167456
Exosomal proteins of colorectal cancer cells
132167456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Rrn6_beta-prop
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
132167456
NCBI-ProteinID:
XP_059434422
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Position
ca1:48788148..48796281
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AA seq
448 aa
AA seq
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MGGQWLSTVEQTSSGRPVFLPNEIECSLVSAVDLECEDLPSFPSLKSGLLILTTHRLIWL
PPDTSSTSTTSSAVAVPLSSVSHIFSAKKSLKAIFHSPRIRFQASLFHEPGSNPEPGPRS
IVVTIVVRGKGDCDAFLGKFWESWRGRAWESEVSGPVRGEDLGSGSGTRSGSGFYTKEGA
VRMVGVSGILRKEQEMWESTDKSLQEAFQDLNALMSKAKEMVMLAEKMRQKLLSGSNSQT
GSTNDDELGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKIPLDRAGGMIN
LIDVYCLFNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFV
RIKALVTNPDALRTGISASDAAITLGIAPAMAKEHLLTAESKGLLCRDISPDGFRFYINL
FPEINQDDVYLVKDHGIYSTWVRVASVS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggcagtggctttctacggtggagcagacgagcagcggccggccggtgttcctc
ccgaacgagatcgagtgctcgcttgtctccgccgtggacctcgaatgcgaagacctcccg
tccttcccctcccttaagtccggcctcctcatcctcaccacccaccgcctcatctggctc
ccccccgacacctcctccacctccaccacctcctccgccgtggccgtccctctctcctcc
gtctcccatatcttctccgccaagaagtccctcaaggccatcttccactccccccggatc
cgcttccaggcctcgctgttccacgaacccggttcgaaccctgaaccgggtccgagatca
atcgtggtgaccatcgtggtgagggggaagggggactgcgacgcgtttctggggaagttc
tgggagagctggagggggagggcgtgggagagcgaggtgtcggggccggttcggggagag
gatttggggtccggttcgggtactaggtcgggttcggggttttatacgaaggaaggggcg
gtgaggatggtgggggtgtcagggatactaaggaaggagcaggagatgtgggagagtacg
gacaagagcttgcaggaggccttccaggatttgaatgctctcatgagtaaggctaaagag
atggtgatgctagcagagaaaatgaggcaaaaacttttgtctggctcaaattctcaaact
ggttcaactaatgatgacgaactgggttccaaagaggagatgcaagattggttattgagt
gttggtattatatcccctgttacaaaagagtctgctggtgcactgtatcatcaacagctg
tctcgtcagttggcagactttgtcaaaattccacttgatagagctggaggaatgatcaat
cttattgatgtctattgtctcttcaaccgtgctcgagggacagaattgatctcaccggag
gatttattgcaagcatgttctctctgggagaagtttgatgttccagtaatgcttcggaag
tttgatagtggagtcatggtcatccagaacaagtcccacagtgatgaggaggtttttgta
agaatcaaggcccttgtaacaaatcccgatgccctccgaactgggataagtgcaagtgat
gctgcaatcacattaggaattgctccagccatggcaaaggaacatcttttaactgctgag
agcaaaggtttgctatgcagagatataagccctgacggctttcgcttttatattaacctc
tttcctgaaattaatcaagatgatgtttacttggtgaaagatcatgggatctatagcaca
tgggttagggtggcctctgtttcctag
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