Corylus avellana (European hazelnut): 132167546
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Entry
132167546 CDS
T09426
Name
(RefSeq) structure-specific endonuclease subunit slx1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132167546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132167546
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132167546
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
132167546
NCBI-ProteinID:
XP_059434532
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All DBs
Position
ca1:45417895..45422606
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AA seq
172 aa
AA seq
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MMVRLLSRTFRSLKSPNPNPNPLKPSSSSPSKDSKPRISLPKLSSRSWCVYLILSTNVPI
KTYVGVTTDFPRRLRQHNGELKGGAKASHAGRPWVCACIIRGFKDQSEACKFESKWKSFS
RKLPRKKENEDVPKHLDETSHLLLQHRQAALKRVNGLFDCCHLEIDWPLNPY
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaggctgctgtccaggacattccgatctcttaaaagtccaaaccctaaccct
aacccattaaagccatcatcatcatcaccgtcaaaagactcaaaaccaagaatttcacta
cctaaattgagctccagatcatggtgcgtctacctcattctctccaccaatgtacccatc
aaaacctacgttggggtcaccaccgatttccctcgtcgtctgagacaacataatggtgaa
cttaaaggtggtgcaaaagcctctcatgcaggaaggccatgggtatgtgcatgtattatc
cgaggttttaaggaccaaagtgaagcttgtaagtttgaatcaaaatggaaaagtttttca
agaaaattgccccgaaaaaaggaaaatgaagacgtgccaaagcatttagatgagacctca
catctgttattgcaacataggcaagcagctctaaagagagttaatggtttatttgattgc
tgccacctagaaattgattggccattgaacccttactga
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