Corylus avellana (European hazelnut): 132167875
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Entry
132167875 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132167875
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132167875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132167875
03019 Messenger RNA biogenesis [BR:
cave03019
]
132167875
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132167875
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132167875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
132167875
NCBI-ProteinID:
XP_059434895
LinkDB
All DBs
Position
ca1:48803805..48810056
Genome browser
AA seq
658 aa
AA seq
DB search
MLPFYNSFPHLSNQTQQTNASTAPPPQQVMPSNPSLVNSCNLVQNPMQFQPQFGMSNAQN
QLLFSNPNAHLNLNVRPSITQPGFVNGPSHLLSLQNTHMGMSRMGSQPGQSHLGLGPHNS
VCNMNTVAGFQGNGQFCNLAQNGNQANVSQPPFVHNFPNLPQQLNQNMVLPNGQYGFPNM
FQNMNQLVPMQMPTSSQVGPYGIPPYLMGGLNQPPQATVPQNPTFLANLPFGLVHCNQVG
QQGNQNQQNLAPPTKDANALKPSTVAAPQLQGNSSAPLNHCPAQPQQFKDLQTSAFTRSQ
GNTFKNGGINAASSNWKNSPSKNFTRNPKRGVPQGGSQKSQFHHVKNEKRKFGFPNEQKG
KGFTNERTGKFGLANSTNQAKEKKRSLSLNYTEQEIQQWREARRKNYPSNANINKKLADS
ERSDREAKLRKAQLKEILAKQAELGVEVAEVPSYYLSDSEKLGHEREETRRPLTKKERFQ
NKFNKRGRYDKKDRFAKKQRLAADKDSLNVASLNQRKPTLLQKLLSADIGRDKSRLLQVF
RFMVMNSFFKDFPDKPLQFPLVMVKEGECEDDVVKEKSSPVGKDAAGSILTTHAKRFNDD
NGEEEENDNGDAAAAAAADDNDENDALGKEASYFVRREGSGIGEGSERPEEEEGEIID
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttctacaattcctttcctcacctttccaaccaaacccagcaaaccaatgct
tccactgctccacctcctcaacaggttatgccatctaatccttcccttgtaaattcgtgt
aatttagtgcaaaatcctatgcaatttcaaccccagtttggcatgagcaatgctcaaaat
caattgctctttagtaatcccaatgcccatttgaatcttaatgtgcggccttccataact
cagcctggtttcgtgaatggaccttcccatcttctttccttgcagaatactcatatgggt
atgtcccgtatgggttctcaacccggtcagtcccatttggggcttggtccacataacagt
gtatgcaatatgaacacggttgcagggtttcaaggtaatgggcaattctgcaatttggcg
cagaatggtaatcaagccaatgtgtctcagcctccttttgtgcataattttccaaattta
cctcaacaactcaatcagaatatggttttgccgaatgggcagtacggttttccaaatatg
tttcaaaatatgaaccaacttgtgcccatgcaaatgccaacttcttctcaagttggtcct
tacggtatccctccctatctaatgggtggtctgaatcaaccacctcaagccacagttcct
caaaatcccaccttcttggcaaacctgccgtttggtcttgttcactgcaatcaggttggg
cagcaaggtaatcagaatcagcaaaacttggctccaccgacaaaggatgcaaatgcgtta
aaaccatcaactgttgcagctcctcaattgcaagggaactcatctgcaccacttaatcat
tgtccagctcaaccccagcagtttaaggacttgcaaacttctgctttcacaaggtcacag
ggcaatacttttaagaatggtgggattaatgctgcaagctccaactggaaaaattcacca
agcaaaaacttcacaaggaatccgaaaagaggggtaccacaagggggatctcagaagtct
cagtttcatcatgtgaaaaatgagaagagaaagtttgggtttcctaatgaacagaagggg
aaagggtttacaaatgagaggacaggaaaatttggccttgctaattctaccaaccaagcc
aaagagaagaagagatctctttctttgaactacacggaacaagaaatccaacagtggcgt
gaagcacgtaggaagaactacccatcaaatgccaacataaataagaagctagcagactct
gagcgcagtgatagagaagccaaactacgaaaagcgcaactcaaggagattctagcaaag
caggctgaattgggagttgaagttgcagaggtaccatcatactatctctcggattcagag
aagctagggcatgaaagggaagagaccagaaggccattgactaagaaggagagattccaa
aacaagtttaataaaagaggaagatatgacaaaaaagaccggtttgccaagaagcagagg
ttagcagcggacaaggattcattgaacgtcgcttctttgaaccaaagaaagccaacacta
ctgcagaaacttctgagtgctgatataggtagagacaaaagccgcttgttgcaggttttt
cggttcatggtgatgaactctttcttcaaagattttcctgataaaccactgcagtttcca
ttagtaatggttaaagaaggtgaatgtgaggatgatgtggttaaagagaaatcttctcct
gtggggaaagatgctgcaggtagcatcttgacaactcatgctaaaagatttaatgatgat
aatggtgaagaagaagaaaatgacaatggcgatgctgccgccgcggccgcggcggatgat
aatgatgaaaatgatgctctaggaaaagaagcatcttattttgttaggagagaaggtagt
ggtattggtgagggaagtgagagacccgaggaagaagagggtgaaatcattgactag
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