Corylus avellana (European hazelnut): 132168132
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Entry
132168132 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132168132
KO
K12586
exosome complex component RRP43
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132168132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132168132
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132168132
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132168132
NCBI-ProteinID:
XP_059435203
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All DBs
Position
ca1:23482977..23488378
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AA seq
302 aa
AA seq
DB search
MGLPDTSRDLSSEVEVDAFRRLFPLRFYERHLSESIRPDGRPLGRARDTTIALGAVASAD
GSGLAKIGSTTMLAAIKMEVMTPSMESPDEGCLAIDFHMPPICSPIVRPGRPAEAAPVVS
KQLSDTISSSGMVDLKELSLVSGKAAWMVYLDIYCLDADGALFDAALLSAVAALSYLQIP
AVSLNEDGRVVVVSEEDGGKPEKEPVNRENRKLTLKSIPFSLTCILHKNYILADPTAEEE
SIMETLVTVVLDSSSQLISLYKPGGPVLANTSAIQDSIALTRQRVRELQKILDEANSGME
VD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgggattgccagatacttccagagatttgtcatcagaagtggaggttgatgctttcaga
cgcctcttccctcttcgtttttatgagcgccatctctcggaatctatccggcctgatggt
aggccacttggaagagctagagatacaaccatagcccttggggctgttgcatctgctgat
gggtcaggattggcaaagattggttcaactacaatgttggctgctattaaaatggaagtc
atgactccttccatggagtcaccagatgagggctgcttagctattgatttccacatgcct
ccaatttgttctccaattgttaggcctggcaggccagctgaggcagcaccagtagtgtca
aaacaattatctgacactatttcaagttctggcatggttgatttgaaagagttatccttg
gtcagtggaaaagctgcttggatggtatacttggacatatactgtttggatgctgatggt
gctctctttgatgctgctttactttcagctgttgctgccttgtcttatttacaaatccct
gcagtttccctaaacgaggatggtagagttgttgttgtgtcggaggaagatggaggaaag
ccagaaaaggagcctgttaatagagagaacaggaagctcacgctgaaaagcattcctttc
tcattgacatgcatacttcacaagaactacatcttggcagaccctactgctgaggaagag
tccatcatggaaactcttgttactgtggttttggattcttcaagtcaactcatttctctt
tataagccaggcggaccagttctcgctaatacatccgctatccaggattccattgcattg
acaaggcaaagagtgagggaactacagaagattttagatgaagccaattctggtatggag
gttgactag
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