Corylus avellana (European hazelnut): 132168442
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Entry
132168442 CDS
T09426
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132168442
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132168442
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
DUF4627
Motif
Other DBs
NCBI-GeneID:
132168442
NCBI-ProteinID:
XP_059435407
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Position
ca2:complement(2928285..2932554)
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AA seq
681 aa
AA seq
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MEQVTWNRRQWGFLVGCLGAILLVFLLAGSGYHVNTTSRRFLEGVKGQKSIEVKQYTDTH
DQLVMVDNGIVQVNFSIPDGHVLGISYNGIPDILDHHNVREDRGYWDVVWNKPKSERIFE
RIAGANFTIITQNEYQVELSFSKIWDTSLSGKSVALNIDKRYVLRSGNSGYYSYAVFERL
EGWPEEEIDQIRIVYKLQSDKFRYMALSDERQRIMPTMDDRVNGQPLAFPEAVLLTNPAD
SQLKGEVDDKYQYSSKTENNKVHGWISNNPPVGFWIITPSNEFRIAGPTKQELTSHAGPI
ALSMFVSCHYAGKDVAMLFEEGEPWKKVFGPIFVYLNSASSQNNPGQLWENAKEQMLSEV
SSWPYKFTQSKDFLSSDQRGTVAGQLLVHDRYIDEKLMHAKSAYVGLAAPGEVGSWQRES
KGYQFWTQADEQGRFIIKNILPGNYNLYAWVPGFIGDYKNDSKITVSPGGEVQMDVLVYE
PPRLGPTLWEIGIPDRSAEEFYVPDPYPNLINKLYKNQSTEKFRQYGLWARYADLYREHD
LTYVINTSDYRKDWFYAHVSRNINDQKYEPATWKILFDLKSVNNNGNYTLRLALASANEA
NLEVRFNDVKAQVAHLRTGVIGRENAIARHGIHGLYWFYSIGVGSDVLQVGKNIIYLTQT
RSKNPFQGVMYDYLRFEGPPN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtaacctggaacagaaggcaatggggtttccttgttgggtgcttaggagcg
attttgctggtgttcttgcttgctggttctggttatcatgtgaacaccacatctaggagg
tttcttgagggcgtcaaaggccaaaaatctattgaggtgaagcaatataccgacacccat
gatcagctggtgatggtggataatgggatcgtccaagtcaatttctcaataccggatggt
catgtcctggggataagttacaatggtatccctgacatacttgaccatcataatgtaaga
gaagatagagggtattgggacgtagtttggaataagcccaaatctgaaagaatcttcgag
agaatagcaggagcaaacttcacaattataacccagaatgaataccaagtagagctttct
tttagtaagatatgggatacttcgctcagtggaaaaagtgttgccttaaacatagacaaa
aggtacgtattgcggagcgggaattcgggatattattcatatgcagtatttgagcggctt
gaaggatggccggaggaggagattgatcaaattagaattgtctacaagctccagagtgac
aaatttcgctacatggcgctatcggatgagaggcagaggatcatgccaacaatggatgac
cgtgtaaatggccagccactcgccttccctgaggctgttcttttgaccaatccagccgat
tctcagcttaaaggagaggtggatgacaagtaccagtactcttcaaagactgagaataat
aaggttcacggatggatatccaataacccacccgttggattctggatcataacacccagt
aatgagttccgtatagcggggccaaccaagcaagaactcacctcccatgccggccccatt
gccctctccatgtttgtgagctgccactatgctgggaaggacgtagcgatgctttttgaa
gagggagagccatggaaaaaagtttttggtcccatatttgtctatcttaactcagcttcc
agtcaaaacaatcccggacaactttgggaaaatgctaaagagcagatgttgagcgaagtg
agtagctggccatacaaattcacgcaatcaaaagatttcctttcttctgatcaacgagga
acagttgcgggtcaattgctagtccatgaccggtacatcgatgagaaactaatgcatgca
aaatctgcttacgtgggtttggcggcacccggggaggtgggatcatggcaaagagaaagt
aagggttatcaattctggacccaggcggacgagcagggacgtttcataatcaaaaacatc
ctacccgggaactataatttgtatgcatgggtccctggttttattggcgattataagaat
gattccaagattactgttagtccaggtggggaggtccaaatggatgtccttgtgtatgag
cctccaagactgggtcctactttgtgggaaattgggatccctgaccgtagtgccgaagag
ttctatgtaccagacccatacccaaatctcatcaacaaattgtacaagaatcaatcaact
gaaaagttcaggcaatatggcttgtgggcccggtatgcagacttatatcgtgagcatgat
ctcacatacgtaattaatactagtgattatcgcaaggattggttctacgcgcatgtttcc
aggaacataaatgatcagaaatacgaaccagcaacatggaaaattttgtttgatcttaaa
agtgtgaacaacaacggaaactacacactccggttggccttggcctcggccaatgaagct
aatttggaggttcggttcaacgatgtgaaggcccaagttgcacacttacgaacaggagtt
ataggaagagagaatgctatcgcgaggcacggtattcatggattatattggttttacagc
attggcgtaggaagtgatgtattgcaagtaggaaagaacataatctatctaacacaaaca
aggagcaaaaatcctttccaaggagtcatgtatgactaccttcgttttgaagggcctcct
aattaa
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