Corylus avellana (European hazelnut): 132168720
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Entry
132168720 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132168720
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132168720
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
90S particles
Helicases
132168720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
132168720
NCBI-ProteinID:
XP_059435730
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All DBs
Position
ca2:complement(16814008..16824137)
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AA seq
491 aa
AA seq
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MDQDVLVDKDFPLFSRPPKRPKLTAATSTTVTQNLEAKTPHVEKATNLDDETSTTTTFAD
LGLAEWAVRTCKELAMRKPTPVQSHCIPKILAGRNVLGVAQTGSGKTAAFALPMLHRLAE
YPFGIFALVVTPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDMLTQKQSLTRRPHVVIA
TPGRIKVLLEDNPDIPPLFSNTKFLVLDEADRILDVGFEEELRVVFQYLPKNRQTLLFSA
TMTSELETLLELSSNKAYFYEAYEGFKTVDTLKQQYIPIPKYKKELYLYHILSKLEDFGV
RSAIIFVSTCRTCHRLSLLLEELDQEAAALHSFKSQSLRLAALHRFKSGQVPVLLATDVA
GRGLDIPLVDLVINYDIPRSARDYIHRVGRTARAGRGGLALSFVFPNEVVLVHEIEAVLG
KQMEKFECKENEVLSNITKVSNAGCVANMNMVDDGFEEKAKERKKQKLKTLSEKGLLKKR
SKKRKGDRSAK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatgttttagttgataaagacttccccttgttttctagaccgccgaaacgc
cccaaactgactgctgcaacctccaccaccgtcacccaaaaccttgaggcgaaaaccccg
catgtcgaaaaagcaacaaaccttgacgatgaaactagcactaccaccacattcgctgac
cttggccttgctgagtgggcagtgcggacctgcaaagagctagcaatgcgcaaacccaca
ccagtgcaatcccactgcataccgaagattcttgcaggccgtaatgtgctcggcgttgcg
cagacggggagcggaaaaactgccgcttttgcgttgcctatgcttcaccgacttgctgaa
tacccttttgggatctttgcactcgtggtgactccaactcgggagctggcgtaccagttg
gccgagcaatttagggcgcttggctcttgcttgaatttgcggtgtgcagtggtggttgga
ggaatggacatgttgacccagaagcagagtttgacaaggaggccacatgtggttattgca
acaccggggaggatcaaggtcttgttggaagataatcctgatattcctcctttgttctcc
aatactaagttcttggttttggatgaagcagatagaattttggatgttggctttgaagag
gaattgagagtggtgttccagtatttgccaaaaaatcgacaaactctattattttctgca
acaatgacaagtgagctagaaacactgcttgagctttcttctaataaggcatacttctat
gaggcatatgaaggctttaagactgttgacactcttaagcagcagtatattcccatcccc
aaatataagaaggagctttatctataccacattttgtctaaattggaggattttggtgtt
cggtctgcgatcatatttgtgtccacctgcagaacttgtcaccgtttgagtttattactg
gaagagcttgatcaggaagcagcggcactgcattcttttaaatctcagtctctaaggctt
gctgcccttcatcgattcaaatctggacaagttcctgtattgcttgcgactgatgttgcc
ggtcgtggtttggatatccctcttgttgatcttgtcattaactacgatattccaaggtct
gcaagagactatattcatcgtgtagggcgtactgcaagagcaggcagaggagggctggct
ctgagctttgtctttccgaatgaagttgttctcgttcatgaaatcgaagctgttcttgga
aaacaaatggaaaagtttgagtgtaaagagaatgaagtgctttctaatattacaaaggtt
tcgaatgccggatgcgtggcaaatatgaacatggtggatgatggctttgaggagaaagca
aaagaacgcaaaaaacagaaattgaaaaccctatcagagaaaggattattgaagaaaagg
agtaaaaagagaaaaggagatagatctgctaaatag
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