KEGG   Corylus avellana (European hazelnut): 132168861
Entry
132168861         CDS       T09426                                 
Name
(RefSeq) uncharacterized protein LOC132168861 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    132168861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cave03400]
    132168861
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     132168861
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 WD40_RFWD3 WD40_MABP1-WDR62_1st RAWUL ANAPC4_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th VWA_3_C PAN2_N
Other DBs
NCBI-GeneID: 132168861
NCBI-ProteinID: XP_059435910
LinkDB
Position
ca2:complement(6917141..6931109)
AA seq 768 aa
MHRVGSAGNTNSSTRPRKEKRLTYVLNDADDRKAIKRKHSAGVNCIAVLKSSGADGRDYL
FTGSRDGTLKRWALNEDASTCSTTFESHVDWVNDAVLAGDNTLVSCSSDTTLKTWNCLSD
GTCTRTLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFVWDLEAALVPVSKSGDAMEDDCS
NGVNGSGNSLPITSLRTISSSNSISAHTSQSHGYVPIAAKGHKESVYALAMNDSGTLLVS
GGTEKVVRVWDPRTGSKTMKLRGHTDNIRTLLLDSTGRLCLSGSSDSMIRLWDLGQQRCV
HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDS
IWAATTDSTVNRWPAEGCNPQKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYKEPTITI
PGTPGIVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVEDYGKVSFEEKKEELFEMVSIP
AWFTVDTRLGSLSIHLDTPQCFSAEMYSADLNIVGKPEDDKVNLARETLKGLLAHWLAKR
KQRFGTLPSANGDVLPGKDISHRSIVHSRIEADSNADNDAMVYPPFEFSTVSPPSIITEG
SHGGPWRKKITDLDGTEDEKDFPFWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQ
GKLSAPRILRIQKVINYVLEKMVLDKPLDGGNPDGAFAPGLGGQLPHSVVGDGSFRSGLK
AWQKLKPSIEILCNNQVLSPDMSLATVRAYIWKKSDDLILNYRVVQPR
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggtagtgcgggcaacacaaacagttctactcgccctcgtaaggagaag
aggttaacatacgtgttgaatgatgcagatgacagaaaggccattaaaaggaagcattct
gcaggcgtaaattgtattgctgtcttgaaatcatcaggagctgatgggcgtgattacctc
ttcactgggagccgtgatggcacgcttaaaagatgggctttgaatgaagatgcatctacc
tgctctactacttttgagtctcatgtggattgggttaatgatgctgtccttgcaggtgat
aatacgcttgtttcctgttcctcagataccacccttaagacatggaactgtttgtctgat
ggaacgtgtacgaggactctccgtcaacactctgactatgttacttgccttgctgccgca
gaaaaaaatagcaatattgttgcctctgggggccttggaggggaggttttcgtatgggat
ctagaagctgcacttgttccagtctcaaagtcaggtgatgcaatggaagatgattgttca
aatggtgtcaatggatcagggaactccctaccgattacaagtttacgtactataagctca
agcaacagcatttctgcgcacacaagtcagtcccatggatatgttccaattgctgccaaa
ggccataaggagtcagtttatgcattagcaatgaatgatagtggaacacttcttgtctct
ggtggaactgagaaggttgttcgtgtttgggacccaagaactggttcaaagactatgaaa
ctacgagggcatacggataacattaggactttgcttctggattctactggcagactttgc
ttatcaggatcttcggactctatgatcagactctgggatcttggccagcagcgctgtgtg
cattcgtatgctgtgcatacagattctgtttgggcacttgccagcactccaacatttagt
catgtttatagtggtgggagagacctttctttgtacttgacagacttggcgacaagagag
agtcttttgctttgcacaggggaacaccctattctgcaattggctttgcatgacgatagt
atatgggctgcaactactgattctactgttaatagatggcctgctgaaggatgcaaccct
cagaaggtctttcaaagaggtggttctttcttagctgggaacttatccttttcgcgggcg
agggtttccttagagggatctacccctgttcctgtttacaaagaaccgacgattaccata
cctggaactcctggaatagtacagcatgaaattttgaataatagaaggcatgtgttgact
aaggatactgctggttcagtcaagctgtgggagatcaccaggggcattgtggttgaggat
tatggaaaggtgtcatttgaggaaaaaaaggaagagctatttgagatggtaagcattcct
gcatggttcacagtggataccaggcttggaagtttatctatccatttggacaccccgcaa
tgcttttcggctgagatgtactcagctgaccttaacattgtggggaaacccgaggatgat
aaggttaatctagctcgagaaactcttaaaggactcttggctcattggttggcgaaaaga
aagcaaagatttggaacgctgccttccgccaatggcgatgtgttacctgggaaggatatt
agccatagaagtattgtgcattcaagaattgaggctgattctaatgccgacaatgatgcc
atggtgtatcctccattcgaattttctactgtttcccctccttccattataactgagggc
tcccatggaggtccatggagaaagaaaattaccgatttagatggaactgaagatgagaaa
gactttcctttctggtgtctggattgtgtgttaaataatcgcctacctcccagagaaaat
accaagtgcagtttttatttacatccatgtgaaggttccgctgtccagatcctgacacaa
gggaaactaagtgcacctcgtatattgaggattcaaaaggtcattaattatgtcctagaa
aagatggtccttgacaaacccttggatggtggaaatccggatggagcatttgctcctgga
cttggagggcagttaccgcactcagtagttggagatggatcttttcggtctggattgaag
gcttggcagaagcttaaaccttcaatagagatattgtgcaacaatcaggtcttgtcccca
gacatgagcttagccacagtacgagcttatatatggaagaaatctgacgaccttattctc
aattatagagtggtccagcccaggtga

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