Corylus avellana (European hazelnut): 132169116
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Entry
132169116 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132169116
KO
K07456
DNA mismatch repair protein MutS2
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132169116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132169116
DNA repair and recombination proteins [BR:
cave03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132169116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
132169116
NCBI-ProteinID:
XP_059436183
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Position
ca2:complement(43222482..43226001)
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AA seq
657 aa
AA seq
DB search
MQLTNLLSSIRKPPILFPKALLKPPNSAESNSHRLTLSRTLQSKTLKTLEWPLVCKQLSS
FTSTPMGFSAIQKAQIPLGRTREESEQLLDQTAAAVEASETMDSRTLDLSGIEDVSEIVD
SAVSGELLTISELCAMRRTLRAAKALIEKLEQLAANVDCPERYLPLLQILKNCNFQVELE
RKIGFCIDCNLLKILDRASEELEMIRLERKRNMESLDSLLKGVSSQIFQAGAIDRPLITK
RRSRMCVGIRASHRYLLPDGVILNVSSSGATYFMEPKEAVELNNMEVWLSNSEKAEERAI
LSLLTSEVVESKIEIKYLLDRILEVDLAFARAAYARWMNGVCPIFTSGGEALNSNEADYA
LSVDIDGIQHPLLLEPSLRSFSDVLTSSSGNAIQLGDGDGAMTSGSLSEGVSNFPVPIDI
KIECGKRVVVISGPNTGGKTASMKTLGLASLMSKAGMFLPAKNCPRLPWFNLVLTDIGDN
QSLEQNLSTFSGHITRICNMMEVASKESLVLIDEIGSGTDPSEGVALSTSILQYLKNHVN
LAVVTTHYADLSLLKEKDSQFENAAMEFSLETLQPTYQILWGSTGDSNALSIAKSIGFDL
NIIARAQQWVGRLKPENQQERKGLLYQSLVQERNRLETQARRAASLHVEVMDLYHEA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaccaacctcctcagctccattagaaaacccccaattctcttccccaaagca
ctcctcaaaccccccaactcggccgagtcaaactcacaccgactcaccctctcgcggaca
ctccaatccaagaccctgaaaaccctagaatggcccttggtatgcaagcaactctcctcc
ttcacatcgacccccatggggttctccgccatccaaaaggcccaaatccccttgggccga
accagggaggagagcgagcagcttctggatcagactgccgcggcagtggaagcatcggag
acgatggattctcgcacgttggatttatcggggatcgaggacgtctcggagattgtggat
tcggctgtttccggtgagttgctcacgatttcggagctctgcgcgatgcggcgcacgctg
cgggcggccaaggcattgatcgagaagctagagcaattggctgcgaacgtagattgccct
gaaaggtacttgcccctgcttcaaatacttaagaactgcaatttccaagtggagttagag
cgtaaaataggattttgcatagattgcaatctgttaaaaatccttgatagggctagtgaa
gaattggagatgatcaggttagaaaggaagaggaacatggaaagtctggattctctgttg
aagggagtctcatctcagatttttcaggctggggcaatcgacagacctctcataaccaag
cgacggtctaggatgtgtgtgggtattagggcttcccaccgatacttacttccagatggt
gtaatattaaatgttagtagttctggtgcaacatactttatggaacccaaagaggcagtg
gagttgaataacatggaagtgtggctttcaaactctgagaaagctgaagagagagcaatt
ttgagcttgcttacatctgaagtagtggaatcaaaaatagagatcaagtatttgttggat
agaattttagaagttgaccttgcttttgcaagagctgcctatgctcggtggatgaatggt
gtctgtccaattttcacttcagggggggaggccttaaattctaatgaagcagattatgct
ttatcagtagatattgatggtatacaacatcctctgctccttgagccctctctgagaagt
ttttcagatgtcttgacatccagctctggcaatgcaattcagttgggtgatggagatggt
gcaatgacttctggaagtttgtcagaaggtgtatctaattttcctgtgccaatagacatt
aaaattgaatgtggaaagagagtggttgtaatatcaggaccaaatacaggtgggaaaact
gcttcgatgaaaacattgggcctggcatctcttatgtcgaaggctggcatgtttttgcct
gctaagaactgcccaaggcttccatggttcaatcttgttctaactgatattggagataac
cagtctctggaacaaaatctctctacttttagtggccacataacgcggatctgtaacatg
atggaggtggcctcaaaagaatcacttgtcctcattgatgaaattggtagtggaactgat
ccttcagaaggtgtggccctttctaccagcatcttgcagtatctcaaaaaccatgttaac
ttggctgttgtgaccactcattatgcggatttgagtctcctcaaagaaaaggatagtcaa
ttcgagaatgcagccatggaattttcactagaaaccttacaacctacttatcagatcctc
tggggaagtactggtgattcaaacgcgttaagtattgctaaatcaattggttttgatcta
aatataattgcacgtgcacaacagtgggtggggaggttaaagccagaaaatcagcaagag
cggaaaggtttgttatatcagtcactagtacaggaaagaaacagattggaaactcaggcc
agaagagctgcatctcttcatgtggaagttatggatctgtatcatgaggcataa
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