Corylus avellana (European hazelnut): 132169146
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Entry
132169146 CDS
T09426
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Module
cave_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132169146
Enzymes [BR:
cave01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
132169146
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
132169146
NCBI-ProteinID:
XP_059436211
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Position
ca2:15625419..15627838
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AA seq
416 aa
AA seq
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MSTAQRFVLFLGVALFLLEAEATSRSRRALGDADADEVISAGPSTVFNVNSFGATADGST
NNAKAFMKAWIAACKSGGGPSTLVFPKGTYVSGPVIFAGPCKGTITVQVQGTIKATTDLS
DYDTQDWFLFESIDGLILTGGGTFDGQGQAVWKYNDCHQNPNCQLLPTSISFFKVKNAQI
HGITSLNSKSFHTHVSGCENMQVHDLTVIAPGNSPNTDGMHVSRSNLVNISSSTIGTGDD
CISIGQGTTHLSVTDVHCGPGHGFSVGSLGKYPNELDVSGIVVSHSSLKGTTNGVRIKSW
PGSSPSRASGIIFDDITMDAVKNPIIIDQKYGSQSITAPSRVQISDVHYKNIRGTTISNV
AVSFICSSAVPCQGIEMVDINLQYKGEGAKVTTVSASCENAKIKYGGKQSPPPCVQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcacaaagatttgttcttttcctcggcgtagctttgttcttgcttgaggct
gaagctacatctcgatctcgtcgtgcccttggggatgctgatgccgacgaagtaattagc
gctggtccaagtacagttttcaatgttaattcctttggtgctacagcagatggtagcact
aataatgcaaaggcatttatgaaggcgtggattgcggcatgtaaatctggtggtggtccg
agtacgcttgtttttcccaaaggaacatatgtgtcggggccagtcatatttgcagggcca
tgcaagggtacaataactgttcaagtgcaaggaacaattaaagcgacaacagatcttagt
gattatgatacacaagactggtttctcttcgaatcaattgatggtttgatacttactggt
ggaggtactttcgatggccaaggccaggcggtgtggaagtacaatgactgtcatcaaaac
cccaactgtcagcttcttcctacttcaattagctttttcaaagtgaagaatgcccaaatt
catgggatcacttccctaaacagcaaatcgttccacacacatgtatcaggctgcgaaaac
atgcaggtccacgatttgactgtaattgctccgggaaatagccccaacacggatggcatg
catgtcagcaggtccaatcttgtcaatatatccagcagcacaattggaaccggtgacgat
tgcatttccattggacaaggaacaacccatctctccgtcactgacgtccactgtggtcca
ggacatggcttcagtgttggcagccttggcaagtatccgaatgagctggatgtgagcggg
attgttgtgtctcactcctccctgaaaggcaccacgaacggtgtgaggatcaaaagctgg
cccggctcatctccaagccgagcttctggcatcatttttgatgatattactatggacgct
gttaaaaatcccattattattgatcagaaatatggttcgcagtcaattactgcgccatcc
agagtgcagattagcgacgttcattacaagaacatcaggggcacgacaatctcgaatgta
gcagtgtctttcatatgcagctcagcggtgccttgccagggcattgagatggtggacatt
aatttgcaatacaaaggggaaggtgcgaaagtaacaaccgtttcagcctcatgcgaaaat
gcaaagattaagtacgggggcaaacagagtccaccaccttgtgttcaataa
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