Corylus avellana (European hazelnut): 132169364
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Entry
132169364 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132169364
KO
K07573
exosome complex component CSL4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132169364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132169364
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132169364
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
132169364
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
132169364
NCBI-ProteinID:
XP_059436390
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Position
ca2:9194230..9211221
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AA seq
200 aa
AA seq
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MEEAGREKEVVTPGEVLGKASDVRAGRGAYVAPHNNLVYASLTGFRRIVSPPPDSPDQDQ
RPTVEVTHHKAHGVIPEPGSVVLARVTKVMAKMASADIMCVGPKSVREKFTGIIRQQDVR
ATEIDKVDMHLSFRAGDIVRALVLSLGDARAYYLSTAQNELGVVSAESTSGATMVPISWT
EMQCPLTAQIEHRKVAKVGG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgggacgagagaaagaggtggtgacaccaggggaagtcctgggaaaggca
tccgacgtgagggcagggagaggcgcctacgtggcgccccacaacaacttggtctacgct
tccctcactggcttccgccgcatcgtctcccctcctcccgactcccccgaccaggatcag
agacccactgtggaagtaactcatcacaaggcccatggtgttattccagaaccgggatcc
gtggttcttgcccgagttactaaagtgatggctaagatggcttcagctgatattatgtgt
gttggtcccaagtctgttcgagaaaagtttactggcataattaggcaacaagatgttaga
gcaactgagattgataaagtggatatgcacttatcttttcgtgctggtgacattgtcagg
gctctcgtgctgtcccttggagatgctcgagcttattatctatcaactgcacagaatgaa
ttgggtgttgtgtctgccgagagtacgtcaggtgcaacaatggttccaataagttggaca
gagatgcaatgcccattaacagcccaaattgagcacagaaaggttgctaaggttggaggt
tga
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