Corylus avellana (European hazelnut): 132169664
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Entry
132169664 CDS
T09426
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132169664
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132169664
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Y_Y_Y
EMC7_beta-sandw
NOMO1-like_2nd
Motif
Other DBs
NCBI-GeneID:
132169664
NCBI-ProteinID:
XP_059436643
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Position
ca2:35503792..35509273
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AA seq
685 aa
AA seq
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MENWRRISSLVGLSLVVCFFFLVVKIPGHYSIKILPFDLCPTLKILSDVKDQEFSDVKLL
TRHRQVVVDNGIVRVTLSRPDGDVLQIEYNGITNLLEDHNKRENRGYWDVAWNQPDQGPK
GSIERIAGTKFRIITENKDQVELSFTQTWNVLSHEKGRVPLNVDKRYIFRRGTSGYYAYS
IFERLKGWPKVDLGYIRAAYKLKKDKFQYMALSDDKLRIMPTQKDREMSHTLAYPEAVLL
TNATNPTLRGEVDDKYQYSSDVKDTKVHGWISLEPPVGFWIITPSEEFRSGGPTKQELTS
HVGPTALCVFMSAHYSGMDLEIKFQDGEPWKKVFGPIFIYMNSVSHQNDYQKLWVDAKEK
MLLEVDSWPYNFTESRDFPSVDQRGTVAGQLLVSDQYINKSLILGRSAYVGLAAPGEVGS
WQRESKGYQFWTQADDEGHFVIKNVRPGDYNLYAWVPGVIGDYKNDTKIAIKPGLQVNLG
ALVYEPPRHGPTLWEIGIPDRTAAEFYVPDPYPTLTNRLYNHSEKFRQYGLWDRYTDLYH
DQDLVYTINVSDYRKDWFFAHVNRNINNGTCESATWQIRFELVNVNKNRNYTFQLALASA
HYAVVQVRFNDARARPAHFSTGYIGMDNAIARHGIHGLYWLYSIDVKGNLLQEGNNTIYL
RQAKSENYFQGVMYDYLRLEGPSEA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggagaactggagacggatttcttcccttgttggattgagtttggtggtttgcttcttc
ttcttggttgtaaagatcccaggccattattccatcaagattcttcccttcgatttatgc
ccaaccttaaaaattctatcggacgtcaaagaccaagaatttagtgatgttaagctgctt
acccgccaccgtcaggtagtggtggataatggcattgtgcgtgtcacattgtcgagaccg
gacggtgatgtgttgcaaatagagtataatggtatcactaatttacttgaggatcataat
aaaagagaaaataggggttattgggatgtagcttggaatcagccagatcaaggtcctaag
ggttcaattgagagaatagcaggaacaaaatttaggattataaccgagaacaaggaccaa
gtagaactttcatttactcagacatggaatgttttgtcccatgaaaaaggacgtgttccc
ttaaatgtagacaaaaggtacatatttcgccgcggcacttcgggatattatgcatactca
atatttgagcgccttaaaggatggccgaaggtagatttgggttatattagggctgcttac
aagctcaaaaaggacaagtttcaatacatggcactatcagacgataagctaaggatcatg
ccaacgcagaaggaccgagaaatgagtcacaccctagcctacccagaggcagttcttttg
acgaatgcaaccaatcctacacttagaggagaggtggatgacaagtatcagtactcgtcg
gatgtgaaagacaccaaagttcatgggtggatatcccttgaaccacctgttgggttctgg
atcataacacccagtgaagagtttcgttcaggtgggcccaccaagcaagaactcacctct
catgtcggccccactgccctctgtgtgtttatgagcgcacactattcgggaatggacctt
gagataaaattccaggatggagagccgtggaaaaaggtctttggacctatattcatttat
atgaactcagtttctcatcaaaatgattaccaaaagctttgggtagacgctaaggagaag
atgttgcttgaggttgatagctggccatataatttcactgagtcaagagatttcccttct
gttgatcaacgtggaactgttgcgggtcaactgctagttagtgaccagtatatcaataag
agcttaattttggggcgatctgcttatgttggtttggcagctcctggagaggtagggtca
tggcaaagagaaagcaaggggtatcaattctggacccaagctgacgatgaaggacatttc
gtgattaaaaatgtccgacccggggactataatttgtatgcatgggtccctggtgttatt
ggggattacaaaaatgacaccaagattgctattaaaccaggtttgcaagtcaacttggga
gcccttgtgtatgagcctccaagacatggtccaaccctatgggaaattggcatccctgat
cgcaccgctgcagagttctatgtaccagacccatatccaacgctcactaaccgactgtac
aaccactctgagaagttcagacagtatggtttgtgggatcgatatacagatttatatcat
gaccaagatctcgtctacaccattaatgttagcgattatcgtaaagattggttctttgct
catgttaacaggaatataaataatgggacatgtgaatcagcaacgtggcagatcagattt
gaacttgttaatgtgaacaagaacagaaattatacattccaattggccttggcatcagcc
cattatgcggtagtacaggttcgattcaacgacgcacgcgccagaccggctcacttttca
acaggatatataggaatggacaatgccatcgcaaggcatggaatccatgggttgtattgg
ctctacagcattgatgtaaaaggcaatctactccaagaaggaaacaacacaatctatctt
agacaggcaaaaagtgaaaactattttcaaggagtcatgtacgactaccttcgtctagaa
gggccttcagaagcctga
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