Corylus avellana (European hazelnut): 132169986
Help
Entry
132169986 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132169986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132169986
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132169986
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
HECT type E3
132169986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
hAT-like_RNase-H
ARM_ARMC5
Arm
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
132169986
NCBI-ProteinID:
XP_059436902
LinkDB
All DBs
Position
ca1:complement(31940767..31950908)
Genome browser
AA seq
995 aa
AA seq
DB search
METRSRKRAEATSAAPSSSSSGPTTRSSKRARLLSSAATSSASSAALSLISTRSRSAASV
KANDHPMDPTTESSGSRRRGRNSDNRDNSEKGKEKEHEIRVRDRDRERERDRDNERSLGL
NVDAGCDDDDNDSEGGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSSSASHQ
SGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESN
PDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQE
HPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQ
YHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSNSGGGQASLSAPT
YTGLIRLLSTCASGSPLGSKTLLLLGISGILKDILAGSGISTNASVSPALSRPAEQIFEI
VNLANELLPPLPQGTISLPSSSNLFVKGSVVKKSSAGSSGKQEDTNGNVPEVSAREKLLN
DQPELLQQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISS
FLAGVLAWKDPHVLIPALQIAEILMEKLPGTFSKMFVREGVVHAVDQLILAGNPNPAGSS
SAEKENESGPGTSSRSRRYRRRSGSTNLDGGASEESKNPGSVNIGSPPSSVEIPSVNSNL
RMAVSSCAKAFKDKYFPSEPGSVEVGVTDDLLHLKNLCMKLNAGRTNEEIVQDAFESFEI
DDDVVEVNSLGDDSVSMGNKKRKRSVGRPQMFDNIMTSFLMLIQMTRRYGQNARLQDGLK
EISDTIQKVRDSVKWNSTYLMLESAVYYRRAFSYLEMTDKNYKHCPTAVEWETVDNIKSF
LACFYQATCAFSGTKYPTANLYFYVIAMIYVSLKEDIVSGDEHKSLMATQMLSKFEKYWL
DFSEVLVVAVILDPRYKLHLVNYYYTKIYGVMNST
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacgtcagcagcgccctcttcttcctcc
tccggtcccaccacccgttcctccaagcgcgcacgcctactctcatccgccgccacgtca
tctgcctcctctgccgctctctcattgatctccactcgctcccgctctgcagcctctgtc
aaagctaacgaccaccctatggaccccaccaccgagtcctctgggtcccgccgccgtggc
cgaaactcggataacagagacaattccgagaaaggaaaggaaaaggagcacgagattagg
gttagggatagggatagggaaagagaaagggatagggataacgagcggagcttggggctg
aacgtcgatgcgggctgcgacgatgatgacaacgatagcgagggcggtggagtcggaatt
cttcaccagaatctgacctcggctagcagcgccctccaggggctgctgcggaagctcggg
gcggggcttgacgatcttttgccgtcgtcggcaatgggctcgtcgtcggcctcgcaccag
agtgggcggcttaagaagattctgtctgggctgagggccgacggcgaggaggggcggcag
gtcgaggcactgacgcagctctgtgagatgctttccattggaaccgaggagtcgctgagc
acattttccgtcgattcgttcgtacctgtgctcgttgggttgctgaatcacgagagcaat
cctgatataatgctcctagcggcgagggcgcttacgcatctgtgcgatgtgcttccttcg
tcctgcgccgcggtggtgcattatggcgcggtttcctgcttttgcgctaggttgcttaca
attgaatatatggacttggctgaacagtctctacaagccttgaagaagatatctcaggaa
cacccgactgcctgtttgcgagctggtgctcttatggctgtgctttcgtatctggatttc
ttttccacaggagttcagcgagtggcattgtctacggctgcaaatatgtgcaagaaactc
ccttcagatgcagctgactttgtgatggaagctgttcccctgttgactaaccttcttcag
tatcacgattcgaaggtgttggagcatgcttctgtttgtttgactcgaattgctgaagca
tttgcatcatctccggataaattagatgaactttgcaatcacggtctggttactcaagct
gcctcgcttatttccaccagcaattctggaggtggacaggcatctctcagtgctcctaca
tacacgggtttaatacgacttctttccacttgtgcaagtggttctcctttgggatccaaa
actttgcttctcctgggtatcagtggtatccttaaagatattttagcggggtcaggcata
tcaactaatgcttcggtttcacctgctttaagtagaccagcggagcagatttttgagatt
gtcaaccttgcaaatgagcttctccctccattgccgcaaggaaccatctccctcccatct
agctccaatttatttgtgaaaggatctgttgttaagaagtcttctgctggcagttctggg
aaacaggaagacacaaatggaaatgttcctgaggtttcagcacgtgagaaattattaaat
gatcagcctgaacttcttcagcaatttggaatggatctccttcccgttctaatacagatc
tatggttctagtgtgaatggccctgttcgtcacaaatgtctttcagtgattggaaaattg
atgtacttcagtactgcagagatgattcagtctttattaagtgtgacaaacatatcaagt
ttcttagcaggtgttttagcatggaaagatccacatgtcttgattcccgcccttcaaatt
gctgagattctgatggaaaagcttcctgggactttctccaagatgtttgttagagaaggt
gtggtacatgctgtggaccaacttattttagctggtaatccaaatcctgcagggtcatct
tctgctgagaaggaaaatgagtctggccctggaacatcatcacgctctaggcgttataga
agacggagtggaagcacgaatctagatggaggtgcttcagaagaatctaagaatcctggt
tcagtaaatattggatcgcctccaagttcggtggaaattccttctgtcaattccaatctt
cgtatggcagtcagttcatgtgctaaagcttttaaagacaagtacttcccttcagagcct
ggttctgttgaagttggagttacagatgatcttctacatttaaagaatctttgcatgaaa
ttgaatgccggtaggactaatgaagaaattgttcaagatgcattcgagtcatttgaaatt
gacgacgatgttgttgaagtaaattcactaggagatgactctgtttctatggggaataag
aaaaggaaaagaagcgtaggaagacctcagatgtttgacaatattatgacatcgttccta
atgctgatccaaatgacccggaggtatgggcaaaatgcaagactgcaagatggattgaaa
gagatcagtgatactatccaaaaggttcgagatagcgtcaaatggaattctacatatctg
atgcttgagagtgcagtttactataggcgtgcttttagttatttggaaatgactgataaa
aactataagcattgtcctactgcagttgagtgggaaacggtggataatatcaaaagtttc
ttagcttgcttttaccaagctacatgtgctttttctggtactaagtatcccactgccaac
ttatatttttatgtgattgccatgatttatgtgagcttgaaggaagacattgtgagtgga
gatgagcataagagtttaatggcaactcaaatgctctctaaatttgagaagtattggttg
gactttagtgaagtgttggttgttgcagttattttagatcctcgttacaagcttcatctt
gtaaattattactatacgaagatctatggagttatgaattctacatag
DBGET
integrated database retrieval system
