Corylus avellana (European hazelnut): 132170165
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Entry
132170165 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132170165
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132170165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132170165
Spliceosome [BR:
cave03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132170165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
CDC45
Motif
Other DBs
NCBI-GeneID:
132170165
NCBI-ProteinID:
XP_059437041
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Position
ca2:complement(49536790..49539214)
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AA seq
430 aa
AA seq
DB search
MKSKRENDDLVEEEGFASESKRRKVVEEESSPSPPPLPIANPLAGLANYDDDEEEEEDER
HRRAEQNSDRKEGGQQDDDDDDDNDDDDQHEQAYSQGKRSREVERRRDCPYLDTVNRQVL
DFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEQVYCLP
DGYEIDDPSLDDIRHVLNQRFTKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFV
NVTIQSLMRVTPLRNFFLIRENYKHSKSSLVHRFGELTRKIWHARNFKGQVSPHEFLQAV
MKASKKRFRIGMQSDPVEFMSWLLNTLHADLKTKKNKSIIYDCFQGELEVVKEIHNKAFT
EKKENSDDQIAVSKLTDGGIKHDADVAETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVY
FDFFVSLVAM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaagagagagaatgatgacttggtggaggaggaagggtttgcttcggaatcg
aagaggcggaaagtggtggaggaggagtcatctccctcgccgcctcctcttcccatagcg
aatcctcttgccggactagcgaattatgatgacgatgaggaggaggaagaagatgagagg
cataggcgtgctgagcaaaatagcgatagaaaggaaggtggtcaacaagatgatgatgac
gatgacgacaacgacgatgacgatcaacatgagcaagcatacagtcaaggaaagcgaagc
cgtgaggtggagcgccggagggactgtccttatcttgataccgttaatcgacaggttttg
gattttgattttgagaagttctgctctgtgtctctctcgaatttgaatgtgtatgcctgt
ttggtctgtgggaagtactaccaaggaagagggaaaaagtctcatgcatatactcacagc
ctcgaagcagggcatcatgtttacatcaatcttcggactgaacaggtttattgccttccc
gatggttatgaaattgacgacccttcattagatgacattcggcatgttctgaatcaaagg
tttactaaagaacaagttgaacaacttgacaagaacaagcaatggtctagggcacttgat
ggttctgattacctcccaggaatggtgggccttaacaacatcaaggagacagattttgtg
aatgtcacaatacaatctttaatgagagttactcctttaagaaatttttttcttatccgt
gaaaattataaacacagcaaatcttcacttgttcatcgatttggagaactcacacggaag
atttggcatgcacggaactttaaaggacaggtgagcccgcatgagtttctgcaggcagtt
atgaaagccagtaaaaaacggtttcggataggcatgcagtctgacccagttgaattcatg
tcatggcttcttaacacactgcatgctgatcttaaaacaaagaaaaataaaagcattatc
tatgattgctttcagggcgaattggaggttgtgaaagagatccataacaaagcttttact
gagaagaaagaaaacagtgatgaccagattgctgtttcaaaactcacagatggtggaatt
aaacatgatgcggatgtggcagaaacttccagaatgccgttcctaatgcttggactggat
ttgcccccacctcctcttttcaaagacgtgatggagaaaaatataataccccaggtatac
tttgacttctttgttagtttggttgcaatgtaa
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