Corylus avellana (European hazelnut): 132170216
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Entry
132170216 CDS
T09426
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03420
Nucleotide excision repair
cave04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132170216
09124 Replication and repair
03420 Nucleotide excision repair
132170216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132170216
03400 DNA repair and recombination proteins [BR:
cave03400
]
132170216
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
132170216
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132170216
TCR (transcription coupled repair) factors
Cul4-CSA complex
132170216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
132170216
NCBI-ProteinID:
XP_059437091
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All DBs
Position
ca2:complement(28193889..28228747)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVIIIGEETIVYC
SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVIAHEKEKVTGLKIELLGET
SIASTVSYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLDDELEETEIDGFCSQVQTLFCHDAVHNQLVQVTSGSVRLVSSTSREMR
YEWNAPSGFSINVATANATQVLLATGGGHLVYLEIGDGTLTEVKHAQLEYEISCLDINPI
GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKELLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFLLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPSRICH
QEQSRTFAICSVKYNQSSPEDSEMHFIRLLDDQTFEFISTYPLDTYEYACSILSCSFSDD
NNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTAIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKV
IKGVGGLSHEHWRSFNNEKKTVDARNFLDGDLIESFLDLNRTKMDEISKVMSVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctggaactacgtcgttacggctcacaagcccaccaacgtgacccactcgtgc
gtcggcaatttcaccggccctcaggagctcaacctcattatagcgaaatgcacccgaatc
gaaattcatttgcttactcctcagggccttcagcctatgttggatgtgccaatatatggg
agaattgcaacacttgaactttttcgccctcatggtgaggcacaggattttctatttatt
gcaacagaaagatacaaattctgtgttcttcaatgggatgccgagaaatctgagcttatt
acaagagcaatgggcgatgtatcagatcgtataggtcgtcctacagacaatggtcagatt
ggcataattgacccagattgcagactaattggactccatttatatgatggattgttcaag
gtcattccttttgataacaaggggcagctcaaagaagcatttaacattaggctcgaggaa
cttcaagttttggatatcaagtttctttatggttgttcaaaacccacaattgtggttctc
taccaggataacaaagatgctcgccatgtcaaaacatatgaggtcgctcttaaggataaa
gattttgttgagggtccctggtctcagaacaatcttgacaatggagctgatttgctaata
ccagtacctccacctctttgtggcgtcattattattggtgaagaaacaattgtctactgc
agtgccagtgcatttaaagcaattccaatcagaccgtccatcacaagagcctatggaaga
gttgatgctgatggttctaggtatttacttggtgatcatgctgggctacttcaccttctt
gtcatagcgcatgagaaagaaaaggtcacgggacttaaaattgagctcttgggtgaaact
tccattgcatctactgtatcatatcttgataatgcatttgtctatattggctcaagctat
ggagattcacagcttataaagctaaatcttcagcccgatgcaaaaggttcatatgtggaa
gtactggaacggtatgtaaatttggggccaattgttgacttttgtgtggtggacctggaa
aggcaaggccaaggtcaggttgtaacttgctctggagcttataaagatggttctcttcgc
atagttcgaaatggaataggtattaatgaacaggcttcagtagaactccaaggtattaag
ggaatgtggtcattaagatcttctactgatgatccatttgacacatttctggttgtaagt
tttatcagtgagacgcgaattttagcaatgaatcttgacgacgaattggaagaaaccgag
atagatggcttctgctctcaagtgcagactctgttttgccatgatgctgtacacaaccaa
cttgtacaggtcacttcgggctctgtgagactggtcagttctacatctagagagatgcgg
tacgagtggaatgctccatctggcttttcgattaatgttgccaccgctaatgccacccag
gttctattggcaactggtggtggccatttagtttatctagaaattggagatgggacattg
acagaagtaaaacatgcacagttggaatatgagatctcatgccttgacataaacccgatc
ggtgagaatcccaactatagtcagctggcagctgttgggatgtggacagatataagtgta
aggatattttcgcttcctgacttgaatcttatcacaaaggagcttttgggaggagaaatt
atacctcgctctgttcttctttgtgcctttgaagggatatcttacttgttatgtgctctt
ggagatgggcatctattaaattttctattgaacacaagtactggggagctgactgatagg
aagaaagtctctctcggcacccagcctattactctccgcactttctcatccaagaatact
acacatgtatttgctgcatctgataggccaactgtcatttacagtagcaacaagaaatta
ctttacagcaatgtaaatttgaaagaagttagccatatgtgccctttcaactctgctgct
ttcccagatagccttgcgatcgcaaaagaaggtgagcttactattggcaccattgatgat
atccaaaaacttcatatccgttctatcccacttggtgagcatccaagccgtatctgtcat
caggagcagtcgaggacctttgctatttgcagcgtgaagtataaccagtccagcccagaa
gattctgaaatgcactttatccgccttctggatgaccagacgtttgagttcatttctact
tacccacttgacacttacgagtatgcttgctccatccttagttgctctttctctgatgat
aataatgtgtactactgtgttggcactgcatacgtattgccagaagagaatgaaccaacc
aagggccgaatattagttttcatagttgaagatgggaagctacagcttattgccgagaag
gaaactaagggagctgtttactctttgaatgcctttaatggcaagctgctggctgctatc
aatcaaaaaatccagttgtacaagtggatgctccgggatgatggtactcgtgaattacaa
tctgaatgtggacatcatggacacatacttgccctctacgtccaaactcgtggagatttc
atcgttgtcggtgatcttatgaagtcaatatccttgctaatctacaagcatgaagaaggt
gccattgaggagcgagcccgtgactataatgcaaattggatgtcagctgttgagattctt
gatgatgacatttaccttggtgctgaaaataacttcaatcttttcactgtccggaagaac
agtgaaggtgccactgatgaggaacggggccgtcttgaggtagttggtgagtatcacctt
ggagaatttgtcaatcggttccggcatggttccctcgtcatgcgcttgccagattccgac
gtgggccagattccaacagccatttttggtactgttaatggtgtaattggagtaattgct
tcgcttcctcacgagcagtatctgtttttagaaaagcttcagtcaaacttaaggaaggtg
ataaagggtgtcggagggttgagccacgagcattggagatcatttaacaatgagaagaag
acagtagatgccagaaatttcttggatggagatctgatcgaatcattccttgatctcaac
cgtactaagatggatgagatttcaaaggtgatgagtgtttcagttgaggagctttgcaag
agagtcgaagaattgacgaggttgcattga
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integrated database retrieval system
