KEGG   Corylus avellana (European hazelnut): 132170337
Entry
132170337         CDS       T09426                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
cave  Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:cave00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cave04121]
    132170337
Ubiquitin system [BR:cave04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     132170337
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_ACSF4 Tricorn_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SCAP WDR54 Beta-prop_VPS8 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 132170337
NCBI-ProteinID: XP_059437263
LinkDB
Position
ca2:13512068..13521419
AA seq 486 aa
MNGTASGAAADEMGYAMSRLEIESDLCDGGKSIHEANNNQGSNKPLNYLDNEIAQVTRLR
SEPHERLSQAVPGRRELPVSTVKMLAGRECNYSGRGRFSSADCCHVLSRYLPVNGPWLVD
QMNSRAYVSQFSADGSLFVAGFQGGHIRIYNVDQGWKVQKNILAKSLRWTVTDTSLSPDQ
RYLVYASMSPIVHIVNVRSAEVESLANITEIHEGLDFSSDDDGGSFGIFSVKFSTDGREV
VAGSNDDSIYVYDLEANKLSLRIPAHTSDVNTVCFADETGNLIYSGSDDTFCKVWDRRCL
AAKDKSVGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRRMSPNTTCSPSFGSYE
WDYRWMDYPPQARDMKHPSDRSVATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSHNSCV
YIYDLVSGAQVATLKHHKSPVRDCSWHPNYPMLVSSSWDGDIVKWEFPGGGEPPSSSNKR
VRRRHF
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaatggtacagccagtggggcagcagctgatgaaatgggttatgcaatgagtagactg
gagatagaatcagacctttgtgatggtgggaagagcatccatgaagccaataacaatcaa
ggatccaacaagccattgaattatttagacaacgagattgcccaggtcacaaggttaaga
tcagaaccccatgaacggttaagccaagccgtacctggtaggcgggagttacctgtttcc
acagttaagatgttggctggtcgagaatgtaattattcaggaagaggtagattctcatca
gcagattgttgtcatgttctaagtagatatttgccagtaaatggtccttggcttgttgac
caaatgaacagccgagcctatgtctcacagttttcagctgatggttctctttttgttgct
ggatttcagggaggccacattagaatatacaatgtggatcaagggtggaaagttcagaag
aacattcttgccaaaagtttgcgatggacagttactgatacatctctttctccagatcag
cgctatcttgtttatgccagcatgtcccctattgtccatattgtaaatgttaggtccgct
gaagtagagtctctggcaaatattacggagatccatgaaggtttggatttttcttctgat
gatgacggaggatcttttggaatattctctgtgaaattctcaacagatggacgagaagtc
gtagctggaagtaatgatgattctatatatgtttatgatcttgaagcaaataagctttcc
ctccggattccagcacacacgtctgatgtgaacactgtatgttttgctgatgaaactggc
aatctcatttattctgggagtgatgatactttctgtaaggtgtgggacagacgttgtctt
gctgctaaagataagtccgtaggggtcttgatgggacaccttgaaggcattacatttatt
gacagccgtggagatggtcgttatttcatttcaaatggcaaagatcagaccataaaactt
tgggatatccggagaatgtcccccaatactacttgcagtccaagctttgggagttatgaa
tgggactacagatggatggactacccaccacaggcaagagatatgaaacacccatctgat
cgatcagtggctacatatagaggtcattccgtcttgcgaactcttatccgctgctacttc
tctcctgcatacagcactggtcaaaagtacatctacactggatcgcacaattcgtgcgtt
tatatttatgatttggtgagtggagcccaagttgcaacactcaagcatcataaatcacct
gtaagagactgtagttggcaccctaactaccccatgcttgtgagctcctcatgggatggg
gatattgtcaagtgggagtttcctgggggcggtgagccgccctcctcgagcaataagaga
gttcggaggagacatttttaa

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