Corylus avellana (European hazelnut): 132170337
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Entry
132170337 CDS
T09426
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132170337
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132170337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Tricorn_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SCAP
WDR54
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
132170337
NCBI-ProteinID:
XP_059437263
LinkDB
All DBs
Position
ca2:13512068..13521419
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AA seq
486 aa
AA seq
DB search
MNGTASGAAADEMGYAMSRLEIESDLCDGGKSIHEANNNQGSNKPLNYLDNEIAQVTRLR
SEPHERLSQAVPGRRELPVSTVKMLAGRECNYSGRGRFSSADCCHVLSRYLPVNGPWLVD
QMNSRAYVSQFSADGSLFVAGFQGGHIRIYNVDQGWKVQKNILAKSLRWTVTDTSLSPDQ
RYLVYASMSPIVHIVNVRSAEVESLANITEIHEGLDFSSDDDGGSFGIFSVKFSTDGREV
VAGSNDDSIYVYDLEANKLSLRIPAHTSDVNTVCFADETGNLIYSGSDDTFCKVWDRRCL
AAKDKSVGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRRMSPNTTCSPSFGSYE
WDYRWMDYPPQARDMKHPSDRSVATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSHNSCV
YIYDLVSGAQVATLKHHKSPVRDCSWHPNYPMLVSSSWDGDIVKWEFPGGGEPPSSSNKR
VRRRHF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtacagccagtggggcagcagctgatgaaatgggttatgcaatgagtagactg
gagatagaatcagacctttgtgatggtgggaagagcatccatgaagccaataacaatcaa
ggatccaacaagccattgaattatttagacaacgagattgcccaggtcacaaggttaaga
tcagaaccccatgaacggttaagccaagccgtacctggtaggcgggagttacctgtttcc
acagttaagatgttggctggtcgagaatgtaattattcaggaagaggtagattctcatca
gcagattgttgtcatgttctaagtagatatttgccagtaaatggtccttggcttgttgac
caaatgaacagccgagcctatgtctcacagttttcagctgatggttctctttttgttgct
ggatttcagggaggccacattagaatatacaatgtggatcaagggtggaaagttcagaag
aacattcttgccaaaagtttgcgatggacagttactgatacatctctttctccagatcag
cgctatcttgtttatgccagcatgtcccctattgtccatattgtaaatgttaggtccgct
gaagtagagtctctggcaaatattacggagatccatgaaggtttggatttttcttctgat
gatgacggaggatcttttggaatattctctgtgaaattctcaacagatggacgagaagtc
gtagctggaagtaatgatgattctatatatgtttatgatcttgaagcaaataagctttcc
ctccggattccagcacacacgtctgatgtgaacactgtatgttttgctgatgaaactggc
aatctcatttattctgggagtgatgatactttctgtaaggtgtgggacagacgttgtctt
gctgctaaagataagtccgtaggggtcttgatgggacaccttgaaggcattacatttatt
gacagccgtggagatggtcgttatttcatttcaaatggcaaagatcagaccataaaactt
tgggatatccggagaatgtcccccaatactacttgcagtccaagctttgggagttatgaa
tgggactacagatggatggactacccaccacaggcaagagatatgaaacacccatctgat
cgatcagtggctacatatagaggtcattccgtcttgcgaactcttatccgctgctacttc
tctcctgcatacagcactggtcaaaagtacatctacactggatcgcacaattcgtgcgtt
tatatttatgatttggtgagtggagcccaagttgcaacactcaagcatcataaatcacct
gtaagagactgtagttggcaccctaactaccccatgcttgtgagctcctcatgggatggg
gatattgtcaagtgggagtttcctgggggcggtgagccgccctcctcgagcaataagaga
gttcggaggagacatttttaa
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integrated database retrieval system