Corylus avellana (European hazelnut): 132170400
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Entry
132170400 CDS
T09426
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132170400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132170400
03051 Proteasome [BR:
cave03051
]
132170400
Membrane trafficking [BR:
cave04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
132170400
Proteasome [BR:
cave03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132170400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
TBK1_ULD
XPC-binding
Dsc3_N
OTU1_UBXL
Rad60-SLD_2
Elf4
Motif
Other DBs
NCBI-GeneID:
132170400
NCBI-ProteinID:
XP_059437360
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Position
ca2:complement(1003158..1008807)
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AA seq
554 aa
AA seq
DB search
MGGDGAAEEGTESSGREGVTVNVRCSNGSKFSVQIGLDSTVGSFKDALAQKCDIPSDQQR
LIYKGRILKDDQTLQSYGLEADHTVHLVRGFAPAAAPANAAGGTNPGGPTTTQSNTRSVG
SNEGEAMGGAGFGASLLPGLGINGMDGGAGGLFGAGFPDFEQVQQQLTRNPNIMREIMNM
PVVQNLMNNPDIMRNLIMSNPQMREIIDQNPELAHVLNDPSTLRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNDNANPFAALLGTQGGDQ
AINPSSTSPTAGSETAAGSPAPNTNPLPNPWTATATAGAVQTNTTRSTPIGDARAQAPAG
LGGLGLPGLEGMLGTMPDASSVNQLMQNPAISQMMQSILSNPQYMNQIIALNPQMRSFLD
SNSQLREMMQNPEVLRQLTSPDTMQQLLTFQQALLSRLGQQQSTQEQGQTGGGTAGPLNN
TGLEMLMNMFGGLGAGSLAVPNRSNVPPEELYATQLSQLQEMGFFDTQENIRALIATAGN
VHAAVERLLGNLGQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggggggtgatggagctgcggaggagggaaccgaatccagcggtcgagagggagtcacc
gtcaacgtgcggtgctccaacggctcgaagttttccgtccagattgggctggactccacc
gtcggatcgttcaaggacgctttggcccagaagtgcgatataccgtcagatcaacagagg
ctgatttacaagggtcggatcctcaaggacgatcagacccttcaaagctacggcttggag
gcagatcatactgtccacttagttcgtggttttgcaccagctgctgcaccagccaatgct
gctggtggaaccaatccgggaggtccaactaccactcaaagtaatactagaagtgttggt
tcaaatgaaggtgaggcaatgggaggagctggttttggagcttcactacttcctggactc
ggtattaatgggatggatggtggtgctggtggtttgtttggagctgggtttccagatttt
gaacaggtgcaacaacagctgactcggaacccaaacataatgagagaaataatgaatatg
cctgttgttcaaaacctaatgaataaccccgatataatgcggaacttgattatgagtaat
cctcaaatgcgtgaaatcattgatcaaaaccctgagctagcacatgtacttaatgatccc
agcactctccgtcagacacttgaagctgcaagaaacccagagctcatgcgtgagatgatg
cgcaacactgacagagcaatgagcaatattgaatcttctcctgagggattcaatatgctg
aggcgcatgtatgaaaatgttcaagagccattcctgaatgcaacgacaatggctgggaat
accggaaacgataatgcgaacccatttgcagctcttttggggacccaaggtggggaccag
gccataaatccatcaagtacatcaccaaccgctggttctgagacggctgctggttctcct
gctcccaatactaacccacttccaaatccttggacagctactgccacagctggagctgtc
caaacaaacaccacgaggtcaactcctattggggatgctagggcacaggcacctgctggc
ttaggtgggcttggtcttccggggcttgaaggcatgcttggtacaatgccggatgcttct
tcagtcaatcagttgatgcaaaatccagctatttcgcagatgatgcaaagcatcctttcc
aaccctcaatatatgaatcagattattgctctcaatccccagatgcgcagtttccttgat
tccaattctcaacttagggaaatgatgcagaacccagaagttcttcgccagttgacttct
cctgatacaatgcagcaactgttgacttttcaacaagctcttctgtctcggcttggtcag
cagcagtcaacacaggaacagggtcagactggaggaggtacagcaggaccattgaacaac
actgggttggagatgttgatgaacatgtttggtggactcggggctggcagcctggctgtt
cctaatagatctaatgtgccgccagaagaactctatgctactcagctgtcgcagcttcaa
gaaatgggtttctttgacacacaagagaatatacgggccttgattgccactgcaggtaat
gttcatgctgcggtggagcgacttttggggaacttgggccagtag
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