KEGG   Corylus avellana (European hazelnut): 132170471
Entry
132170471         CDS       T09426                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    132170471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cave04121]
    132170471
   03036 Chromosome and associated proteins [BR:cave03036]
    132170471
Enzymes [BR:cave01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132170471
Ubiquitin system [BR:cave04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132170471
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     132170471
    Noncanonical PRC1 (PRC1.1)
     132170471
    Noncanonical PRC1 (PRC1.3/1.5)
     132170471
    Noncanonical PRC1 (PRC1.6)
     132170471
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-UDP zf-rbx1 zf-C3HC4_5 zf-RING_10 zf-RING_11 ZNF512_C2HC zf-Nse
Other DBs
NCBI-GeneID: 132170471
NCBI-ProteinID: XP_059437449
LinkDB
Position
ca2:complement(41852417..41860115)
AA seq 440 aa
MPAQKRGHDAAEDDPVQDTQSNRHEHLEDAEESDRSASSSNGDNKDEFVAVKLPDIRKEV
QCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL
IAALYPDIDKYEEEELAFHEEERARNKQIQASIAQTLQRQAEALGKKRYTVRRSRGYRNL
RGRRNYRNAAESPGSDDNEDVNGNDGGKDSSSADEHTEVRPKRSKRWGGARFSQPSPSAA
DVDGGGDENDSEINREPMGASAGLVGSSERLAWGKNGMRSHTRYSSMSGGNGKNARNSRL
SKLADYLRNLEEKDDKLTINLMLVSLDEQSIPRLERPYLCCRSTLSVRQLCQYVAVQAAL
EDNEVVLYLVRELHSKIDLSTSASSPLSKSNVIDPGKDKLRVLGEEETLAGLMTNYFIHG
YLLLAYTRKSWNSNFLTGLS
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgccggcgcagaagcgaggtcacgatgcggcagaggatgatcctgtgcaagacacccag
agcaaccgccatgagcatctggaggacgcggaggaatctgatcgaagcgcttcgtcgagt
aacggggacaacaaggacgaatttgttgcagtgaaactgccagatattcgtaaggaagta
caatgtccaatctgtctagggatcattaggaaaactagaacagtaatggaatgcctgcat
cgcttctgcagggaatgcattgacaaatctatgcggttggggaacaatgaatgccctgcc
tgccggacacattgtgctagtcgtcgctccttaagagacgatccaaactatgatgcctta
attgcagccttgtatccagatattgacaagtatgaggaagaggaattggctttccatgaa
gaggaaagggctcgcaataagcagatacaagcttccattgcccaaactcttcaacggcaa
gcagaagctctgggtaagaagcggtatacagttaggagatcacggggctatcgaaatttg
agaggaaggagaaactatcgaaatgctgctgaaagtccaggatccgatgacaacgaggat
gtgaatggtaatgatggaggcaaagattcatcttctgctgatgagcacacagaagtcaga
cccaagagaagcaaaagatggggaggagctcgattttctcagccttctccttcagctgct
gatgtagatggaggcggtgatgaaaatgattctgaaataaatcgagaacccatgggtgca
tctgctggacttgttggcagctcagaaaggcttgcctggggcaaaaatggcatgcggagt
cacacacggtatagcagtatgagtggtggaaatggtaagaacgctcggaacagccgcctc
tcaaaattagctgattatctgcggaacttagaggaaaaggatgataagttgactatcaac
ctcatgcttgtttctttggatgaacaaagtatcccacgtttggagaggccctacctttgc
tgcaggtccaccctgtcagtcagacaactgtgccagtatgtagcagtccaggctgcattg
gaagataatgaagttgtactatacttggtaagagaattacattccaaaatcgacctttca
acctccgcaagttctccactgtccaagtccaatgtaattgatccgggcaaagataagtta
cgagttctaggggaggaggaaactctggcaggacttatgacaaactactttattcatgga
tatttgcttctggcatacacaaggaagtcatggaactcgaattttctgacgggtttgtca
tga

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