Corylus avellana (European hazelnut): 132170488
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Entry
132170488 CDS
T09426
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1
KO
K14485
transport inhibitor response 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132170488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132170488
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132170488
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
132170488
NCBI-ProteinID:
XP_059437467
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Position
ca2:44776961..44792993
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AA seq
584 aa
AA seq
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MDPKRKKDCHDSGESTRVASTFPDEVLERVLALVKSHKDRSSVSLVCKDWYDAERWSRTH
VFIGNCYSVSPEIVVRRFPNVRSVTLKGKPRFSDFNLVPPNWGADIRCWLVVFAAKYRCL
EELRLKRMTVSDESLEFLALSFPNFKALSLHSCDGFSTDGLAAIATHCKNLTELNIQEND
IYDKSGCWLSCFPENFTSLEVLNFAYLNNDVNFEALERLVSRCKSLNVLKVNKNITLEQL
QRLLICAPKLTELGTGSFLPELTDRQYSELKRSFSICSNLNVLSGLSEATALYLPALYPA
CTNLTFLNLSDAALQSEEFAKLLVHCPRLRRLWVLDTVEDKGLEAVGSNCPLLEELRVFP
SDPYEEGIVHGVTESGFIAVSYGCRRLHYVLYFCRQMTNAAVETIVQNCPDFTHFRLCIM
TPCQPDYRTNEPMDKAFCAVVKTCTKLRRLAVSGLLTDMTFEYIGKYAKNLETLSVAFAG
SSDWGMQCVLGGCRKLRKLEIRDCPFGNAALLSGFEKYESMRSLWMSDCKVTMNGCRFLA
KEMPRLNVEVMKEDGSDDSQADKVYVYRSVAGPRRDAPPFVLTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaagagaaagaaggactgccatgactcgggcgagtcgacccgggtggcctcg
acgttcccggacgaggttctggagcgagttctggctctggtgaagtcccacaaggaccgg
agctccgtctctctggtctgcaaggattggtacgacgccgagcggtggtcaaggacccac
gtcttcattggaaactgctactcggtgtcgccggagatcgtggtccggcggttcccgaac
gttcggagcgttaccctgaaagggaagccccggttttcggactttaatctggttcctccg
aattggggcgctgatattcgttgttggcttgtggtttttgcggctaagtaccggtgtctt
gaagagctgaggctcaagaggatgactgtgagcgacgagagcttggagtttttggctctt
tcttttcccaatttcaaggctctctcgcttcacagctgtgatgggttcagcactgacggg
cttgcagccattgccactcactgcaagaatttgactgagctcaacatacaggagaatgac
atctatgataaaagtggttgttggttgagttgcttccctgagaacttcacatcattggaa
gtactaaactttgcctatttgaataatgatgtcaattttgaagctcttgagagactggtt
agtaggtgcaaatcgttgaatgttttaaaggttaataaaaatataaccttggaacaatta
caaaggctgcttatttgtgcacccaaattaacagagcttggtactggctcatttctgcct
gagcttacggaccgccagtactcagaacttaaaaggtcattcagcatttgcagtaatctc
aacgtactctctggtttgtcagaagctacagccctatatctcccagctctataccctgcc
tgtacaaatttgacattcttgaatttgagtgatgctgctctgcaaagtgaggaatttgct
aagcttcttgttcactgtccgcgtcttcggcgcctatgggtcctcgatacagttgaagac
aagggtttggaggccgttggatccaactgtcctctgcttgaggaacttcgtgtcttccca
tccgatccctatgaggagggtattgtccatggggtgactgaatctgggttcattgctgtc
tcttatggctgcaggagactacactatgttctctacttttgccgacagatgactaatgct
gctgtagaaaccattgtgcagaactgtcctgatttcacccacttcaggctttgcataatg
accccatgccaaccagattaccggacgaatgagcctatggataaggctttttgtgcagtg
gtgaaaacttgcactaaactccggaggcttgcagtttcaggtttattgactgacatgact
tttgagtacattgggaagtatgccaaaaacttggaaactctttcggttgcttttgctgga
agcagtgattggggtatgcagtgtgttttgggaggttgtcgaaagctgaggaaacttgag
ataagggactgcccatttgggaatgcggcattactatcaggtttcgagaaatatgaatcc
atgcggtcactatggatgtcagactgcaaagtgacaatgaacgggtgtagattcttggca
aaagagatgcccaggttgaacgtcgaggtaatgaaggaagatgggagtgatgacagtcag
gccgacaaagtttatgtttatcgttccgttgcaggcccgagaagggatgctccacctttt
gttctcactctctga
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