Corylus avellana (European hazelnut): 132170528
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Entry
132170528 CDS
T09426
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132170528
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132170528
Enzymes [BR:
cave01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132170528
Protein phosphatases and associated proteins [BR:
cave01009
]
HAD phosphatases
Fcp/Scp phosphatases
132170528
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132170528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
132170528
NCBI-ProteinID:
XP_059437519
LinkDB
All DBs
Position
ca2:complement(43505521..43517367)
Genome browser
AA seq
961 aa
AA seq
DB search
MNMYKAVVYQGEEVLGEVEMYPVENKNKNNNNNLMIEVKEIRISHFSQASERCPPLAVLH
TITSSGICFKMESKSSQSQDSPLYLLHSSCINQYKTAVMPLGGEELHLVAMYSRNNEKQY
PCFWGFNVASGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSEVD
PQRISGMQAEVKRYQDDKIILKQYAENDQVLENGKVIKTQSEIVPALSDNHQPIIRPLIR
LQEKNIILTRINPQIRDTSVLVRLRPAWDDLRSYLIARGRKRFEVYVCTMAERDYALEMW
RLLDPDSNLINSKELLDRIVCVKSGSRKSLFNVFQEGLCHPKMALVIDDRLKVWDEKDQP
RVHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVRGGFFKDFDEGLLQKICDVNHEDDI
KDIPSAPDVSNYLVSEDDASASNGNKDPLSFDGMADTEVERRLKEALSASSTVTNLDPRL
APALQYTAGSASSSVPLPTTQASMMPFPNIQFPQPASHVKPLGHVVGPPEPSLQSSPARE
EGEVPESELDPDTRRRLLILQHGQDTRDHASTEPSFPVRPPLQVPGPRVQSRSGWFPVEE
EMSPPQLNRAAPKEFPLDSEPMHIEKHGTHPSFFPKGESSITSDRVLHENQRLPKEAFHR
DDRLRLNHTLSSYHSLSAEEIPFSRSSSSNRDLDFESGRGVSNAETSTVVLQEIAMKCGT
KVDFRPALVASAELQFSIEVWFAGEKIGEGIGRTRREAQRLAAEGSLKNLANIYMSRVKP
DSGPVHGDASMFLNANDNGFVGNLNSFGNQPLSKEESVSFAIASEPSRLLDPRLEGSKKS
MGSVSALKELCTMEGLDFAFQPRPPPSGNSVQNDEVYAQVEVDGQVLGKGMGLTWDEAKM
QAAEKALGSLRSMLGQFSQKRQGSPRSLHGMPNKRLKQEFPRVMQRMPSSARYAKNAPPV
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtataaagcggtggtgtatcagggggaggaggtactgggagaagtagagatg
tacccagtagagaacaagaacaagaacaacaacaacaacttgatgatcgaagtgaaggaa
atcagaataagtcacttttcgcaagcgagtgagaggtgtccaccactggcagtgctccat
accattacgtctagtgggatttgcttcaaaatggagtcaaagtcctcgcagtcacaggac
tcgccgctctatcttttgcactcctcgtgtatcaaccagtacaagactgcagtaatgcca
ctaggaggggaggagcttcacttggttgctatgtattccaggaataatgaaaaacaatat
ccatgtttctggggattcaacgttgcatcaggactttatgattcttgtcttgtcatgctg
aaccttagatgtcttggaatagtatttgaccttgatgaaacactcatagtagcaaataca
atgcgctcatttgaggataggattgaggccctacagcggaaaataaacagtgaagtggac
ccacagcggatttctggtatgcaggcagaggtcaagcgttatcaagatgacaagattata
ttgaagcaatatgctgaaaatgatcaggtccttgaaaatggaaaagtgatcaaaactcag
tctgagattgttcctgccttgtcagataaccatcaacctatcattcggccacttatacgg
ttgcaggagaagaacattattctgacccgcatcaatccgcagattcgcgatacaagtgtt
cttgtgaggttgagacctgcatgggatgatctccggagctacttgattgcaagagggcgc
aaacgttttgaggtttatgtttgcacgatggctgaaagggattatgctttagaaatgtgg
aggctacttgatccagattcaaatttgataaactcaaaagaattattggatcgcattgtt
tgtgtcaagtctggttcaaggaagtcactgttcaacgtcttccaagaaggcttatgccat
cctaagatggcattggtcattgatgatcgcttgaaagtgtgggatgagaaagatcaacca
cgggtgcatgttgttcctgcatttgctccatactacgcaccccaagctgaggcaaataat
gctatacctgtcttgtgtgtggcgagaaatgttgcctgcaatgttagaggtggttttttc
aaagatttcgatgagggtcttttacaaaagatttgtgatgttaatcatgaagatgatatt
aaagatattccctctgctcctgatgtgagcaactatttggtttctgaggatgatgcttct
gcttcaaatggaaacaaagatccactttcttttgatggcatggcagatactgaggttgaa
cgaaggctaaaggaagcactatcggcttcttcaacagtcactaatctagatccaaggctt
gctcctgctcttcagtatacagcaggatcggcttctagttcagttccgctgccaactact
caggcctccatgatgccatttcccaatatacagttccctcagcccgcttcacatgtgaaa
ccattgggtcatgttgttgggcccccagaaccaagcttgcaaagttctcccgctagagaa
gagggtgaggtaccagaatcagaattagatcctgatacaaggcggaggctacttatattg
caacatgggcaagatacaagagatcatgcatcaactgaaccttcatttcctgtaagacct
ccgttacaagttcctggtccacgtgtacaatcacgcagtgggtggtttccagtggaggaa
gagatgagtccaccacaactgaaccgagcagcacccaaagaatttcccttagattcagaa
ccaatgcatattgagaagcatggaactcatccatcttttttccctaagggtgagagttct
attacttctgatagagttcttcatgaaaatcaaagattgccaaaagaggcttttcataga
gatgatcgattgagattaaaccatacgctgtctagttaccattctctctcagctgaggag
attccattcagtcgatcatcttccagcaacagggatcttgactttgaatctgggcgaggt
gtttcaaatgcagaaacttcaactgtagtgttacaggaaattgcaatgaagtgtggaacc
aaggtggacttcaggccagctttggttgctagtgctgaattgcaattctccattgaggtc
tggtttgcaggagagaaaattggtgaaggaattggtagaacaagaagggaagcgcaacgt
ctggctgctgagggttctcttaagaacttggctaatatatatatgtcacgtgttaagcct
gattctggacctgtgcatggggacgccagcatgtttctcaacgcaaatgacaatggtttt
gtgggtaatttgaattcttttgggaatcagccattgtccaaagaggagtctgtttcgttt
gcaattgcatctgaaccatctaggcttctggaccctaggttggaaggttcgaagaagtca
atgggttcagtctctgcactgaaggaattatgtacaatggaaggccttgattttgctttc
cagcctcggcctccaccttctggtaattcagttcagaatgatgaagtttatgcacaggtt
gaagtagacggacaggtattagggaaagggatggggctaacatgggatgaggctaagatg
caggctgcagaaaaggcgctcggaagtttaagatcaatgcttggtcaatttagtcagaag
cgtcagggttctcctaggtcattgcatgggatgccaaataaacgtctgaagcaagaattt
ccgcgagttatgcagcggatgccttcttctgctagatatgccaagaatgctcctcctgta
ccttga
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integrated database retrieval system
