Corylus avellana (European hazelnut): 132170555
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Entry
132170555 CDS
T09426
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132170555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132170555
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
132170555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
132170555
NCBI-ProteinID:
XP_059437555
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All DBs
Position
ca2:1526083..1533995
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AA seq
790 aa
AA seq
DB search
MISDGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLAQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERNELRDLVGKNLHVLGQVEGIDLDLYKDTVLP
RVLEQVVNCKDEIAQFYLMDCIIQVFPDEYHLQTLDVLLSACPQLQPSVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQVDMPTIGVVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGKGKIVDSKATKQIVALLSAPLEKYNDIVTALKLSNYPRVLE
YLDNETNKVMATVIIQSVMKNKTCISTDDKVEALFELVKGLIKDLDGTLDDEIDEDDFKE
EQNSVARLIQMLYNDDPEEMFKIIGIVRKHILTGGPKRLPFTVPALVFSCLKLVRQLQGQ
EENPFGDETSTTPKKIFQLLNQTIEALLIVPAPELSLRLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMHVFGIENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQENMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVTLFVEILN
KYLYFFEKGNPQITVSTIQGLLELITTEMQSDSTSPDPSADAFLASTMRYIQFQKQKGGA
VGEKYEAIKA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgacggagtcgaagacgaagagaaatggctcgccgccgggatcgccggtctc
cagcagaacgccttctacatgcaccgcgccctggattcgaacaatctccgagacgccttg
aagtactccgctcagatgctctccgagctccggacctccaggctctcccctcataaatac
tatgaactctatatgcgtgcattcgatgagttgaggaagctggagatgttcttcaaggaa
gagactcgccgtggctgctccattatcgatctctacgagcttgtgcagcacgcgggtaac
attttgcccagattgtatttactctgtacagtaggatctgtatacatcaaatcgaaggaa
gctccggccaaggatgtgctcaaagaccttgtggagatgtgccgtggcattcagcatcct
gtacgcggcctcttcttaaggagttaccttgctcaagtcagtagggataaattacctgat
attggttccgagtacgaaggagatgctgacactgtcatggatgcagtagagtttgtactc
caaaacttcacggaaatgaacaagctttgggtgcggatgcaacatcagggacctgcccgg
gaaaaggagaaacgggagaaagaaaggaacgagctacgtgatcttgttgggaagaacctg
catgttctcggccaggttgagggtattgaccttgatttgtacaaagatactgtgcttcct
agagtattagagcaggttgtcaattgtaaagatgagattgcccaattctacttgatggat
tgcataatccaagtctttcctgatgagtatcacttgcaaactcttgatgtactgttgagt
gcttgccctcagcttcagccatctgtcgacatcaagacggtgctatcccagttaatggaa
aggctgtcaaactatgctgcttcaagtgcagaagtgttgcctgagttcttgcaagtggaa
gctttttcgaaattgagcaatgccatagggaaggtgatagaagcacaagttgacatgcct
acaattggagttgtaactttatattcttctcttcttacattcacacttcatgtccaccct
gatcggcttgactatgcggatcaagtgttgggagcatgtgttaagaaactctctggcaaa
ggaaagattgtagacagcaaagcaacaaaacagattgtcgcgctcttaagtgctccactt
gagaaatataatgacattgtcacagccttgaagctttcaaactacccccgtgttttggaa
tacctagacaatgaaacaaacaaagtcatggcaactgtgataattcaaagcgttatgaaa
aataaaacttgtatttctactgatgacaaggttgaggcattgtttgaattagtcaagggt
cttattaaagatttagatgggactcttgatgatgagattgacgaggatgatttcaaggag
gagcaaaattctgttgcacgtcttattcagatgctttacaatgatgatcctgaagaaatg
ttcaagatcattggtattgtgaggaagcatatcctgactggaggaccgaagcgtctacca
tttactgttccggctcttgttttctcttgtcttaagttggttaggcagttacaaggccaa
gaggaaaatccttttggagacgagacatcaactacgccaaagaaaatttttcagcttttg
aatcagactattgaggctctgttaattgttccagcacctgaactttcattacggttatat
ctgcaatgtgctgaggctgcgaatgactgtgatttagaacctgttgcttatgagtttttc
acccaagcatatattctttatgaggaagaaatatcagattccaaggcacaggtgactgcg
atacatttaataatagggactcttcagagaatgcatgtctttggtattgagaacagagat
actttaacgcacaaggccacggggtattctgcaaagcttttaaagaagcctgatcagtgt
agagctgtttatgcgtgctcgcatcttttctgggttgatgatcaggagaacatgaaagac
ggagagagagtcctgctttgcctaaagcgtgcattgagaattgcaaatgcagctcaacaa
atggccaatgcagcgcgaggtagcaccggatcggtgacactatttgttgagatactgaac
aagtacctttatttctttgagaaagggaatccccagatcactgtttccacaatccagggc
ctgctggaattaattactacggagatgcaaagtgactctacttctccagatccatctgcg
gatgctttccttgccagcacaatgcggtacatccagttccaaaaacagaaaggtggtgca
gtgggggagaagtacgaggccatcaaggcgtga
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