Corylus avellana (European hazelnut): 132170916
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Entry
132170916 CDS
T09426
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132170916
03400 DNA repair and recombination proteins [BR:
cave03400
]
132170916
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
132170916
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132170916
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
132170916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA
UBA_7
ResIII
UBA_9
UBA_DHX29
Motif
Other DBs
NCBI-GeneID:
132170916
NCBI-ProteinID:
XP_059438054
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All DBs
Position
ca2:5191828..5200818
Genome browser
AA seq
906 aa
AA seq
DB search
MDGDDISSNQVIERLIEMGFEHSAVTEAVKAKGSSLDDALEYVLNGPRRNSGGTSISSTC
STSNGKAVQKRALSSLHPSSQTRQSSILNHFQFTARPKRNRVDVLSDVLVLGSNVLPSCV
EEPKDLSGIGRNFKSEVEPFLVDCPRELEIGSDWEKKVTSLLQKHFGYSSLKNFQKEALA
AWLAHQDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFL
GSGQPDSTVEQKAMQGMYSIIYSCPETALRLIKPLQRLAESRGIALFAIDEVHCVSKWGH
DFRPDYRRLSLLRENFSASSLKFLKFDIPLMALTATATTQVREDILKSLRMSRETKTVLT
SFFRPNLRFLVKHSRTSSPSSYEKDFRELIDIYVRKRKSAGKKQTVISQELDDASDGSEN
GSISEADRSSPNDLDNIEDSYSGSDDEEVYAVKENGSIASKGKEMSVEYLENDVDIFQGV
DDWDVAFGEFSGQSPPACWDLGGLSETIDPPNKPEERLRLLREPLEQGLTIIYVPTRKET
LRITKYLCGFGVKAAAYNASLPKSHLRRVHKEFHENSLEVVVATIAFGMGIDKLNVRRIV
HYGWPQSLEAYYQEAGRAGRDGKLAECTLYANQTRVPSLLPNKRNEDQTKKAYKMLSDCF
RYGVNTSCCRAQTLVEYFGEDLREKCLLCDVCVDGPPEMQNLKEEADLLMQVIAAHYDKS
SFMDGLYDDTMCTDIKQRRSTEMPNLRVLVSKIREQSQKFVATDLRWWQGLARIMEDKGY
IREADNKIHVQIKFPAPTKLGLEFLQSSREQPFNVYPEADMLLSVSKPKSYSSFAEWGRG
WADPEIRRQRLERMQVQPNRKLDGARGSRKQKRRAPRKSHGRKSNKQNPSSRTVRGRIEA
KLSKYK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgatgatatatcttctaatcaagtcatcgaaagactaattgaaatgggattt
gagcattccgctgtcacagaagctgtaaaagcaaaagggtcatctttggatgatgcactt
gagtatgtcttgaatggtcctcgtagaaatagtgggggtacatcaattagttccacctgt
tccacaagcaatggcaaggctgtgcaaaaaagagccttgtcctccttgcatccttcaagt
caaacacgccagtctagcatactgaaccatttccaattcacagctagacccaaacggaac
agggttgatgttctatctgatgtgttggttttgggatcaaacgtattgccttcttgtgta
gaagaacctaaagatctttctggtattggtcgtaactttaaatctgaggtagagccattt
ctagttgattgccctcgagagttggaaattggatcagattgggagaagaaagttaccagt
ctcttgcaaaagcattttggttattcatccttaaaaaatttccaaaaggaagccttggct
gcttggttagctcaccaagactgtcttgtccttgcagcaacagggtctgggaaatcactg
tgtttccagattccagcattattaacagggaaggttgtagtggttatttcacccttgatt
agcttgatgcatgatcagtgcttaaaactagccaaacacggggtgtctgcttgctttctt
ggatctgggcaacccgacagtactgtggaacagaaagcgatgcaaggcatgtatagcata
atatatagttgcccagagacagctttaagattgataaaaccacttcagaggcttgcggaa
agtcgtggaattgctttgtttgcaattgatgaagtccattgtgtttctaagtggggccat
gattttcggcctgattacaggcgattgtctttattacgagagaacttcagtgctagcagt
ttaaaattcttgaaatttgatataccgctgatggcattgactgctactgccacaacacag
gttcgagaagacattctcaagtctctacgcatgtcaagggaaacaaagactgtgcttact
tcatttttccggccaaatcttcggtttttggtaaaacatagtagaacatcgtcaccatct
tcctatgagaaggatttccgtgaactgatagacatatatgtcagaaagagaaagagtgct
ggcaagaaacagactgtaatctcacaagaattagatgatgcatctgatggctctgagaat
ggtagtatatctgaggcagatagaagttctccaaatgatttggacaacattgaggattcc
tattctggcagtgatgatgaagaagtatatgcagtgaaggaaaatggttcaatagcttca
aagggaaaagaaatgtcagttgaatatttggaaaatgatgttgacatttttcagggtgtg
gatgattgggatgttgcctttggtgaattctctggacaatctcctcctgcatgctgggat
ttgggtgggctatctgagacaattgatccaccaaacaaaccagaagaaagactaagactt
ctgcgtgagcctttagagcaaggactaactattatatatgttcctactagaaaagaaaca
ttgaggatcacaaaatatctttgtgggtttggtgtgaaagctgctgcttataatgcttcg
ttgccaaaatcacatttaaggcgggttcacaaggaatttcatgaaaactctttagaggtt
gttgttgcaacaattgcttttggaatggggattgacaaattaaatgtccgaagaattgtc
cattatggttggccacagagtttggaggcatattatcaagaagcaggtcgagctggcagg
gatgggaaattagcagaatgcactctatatgcaaaccaaacacgagtgccatcactcttg
ccgaataaaagaaatgaagatcagactaaaaaagcatataagatgctatctgactgcttc
agatatggcgtgaatacttcttgctgtcgggctcagacacttgtggagtactttggggag
gatttaagggagaagtgtctattgtgtgatgtttgcgttgatggacctcctgaaatgcag
aatttgaaagaggaggctgatcttttgatgcaggttattgcagctcattatgataagagc
agtttcatggatgggttatatgatgataccatgtgcactgacattaagcaacggagatct
acagaaatgccaaacctcagagtgcttgtcagtaaaataagggagcagtctcaaaaattt
gtggcaactgatctgcgttggtggcaaggtcttgcacgaattatggaagataaagggtac
atccgagaggcagataacaagattcatgttcagattaaattcccagcgccaacaaaactt
ggcttggagtttttgcaatctagtagggagcaacctttcaatgtttatcctgaagcagat
atgctgctctcagtgagcaagcccaagtcttattcatcttttgcagaatggggaagaggc
tgggcagatcctgagatccgtcgtcaacgcttagagagaatgcaagtgcaaccgaataga
aagctggatggggcacgtggttcacggaaacaaaagcgtcgagcaccacgaaagtcacac
ggtagaaaatcaaacaaacagaacccatcttcaagaactgttcgaggaaggatagaagca
aaattatcaaaatacaagtga
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