Corylus avellana (European hazelnut): 132170957
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Entry
132170957 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132170957
KO
K14315
nucleoporin NDC1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132170957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132170957
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132170957
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
132170957
NCBI-ProteinID:
XP_059438102
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Position
ca2:complement(27257135..27266970)
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AA seq
546 aa
AA seq
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MSATSPEMIVKNRFLGFLIWQSIPSTAIFILFKTFISTITTSTSTSSSSSRNPLLSYAPS
LITLLTFFTFHLSQLLFSASLSLVSSPHPHRPAYPFELILGLVRFLLVSDSSSASVPVDF
RFRAKVSLSFVLFVAACAVSGSLGMVSMCWVKSSSFDVEWVIRGFGVGLLYGLVYVYKRR
WVLEFPIIQRPPFFSFKMGLPSATTCAFALSGVAYLFSAVLGAILPDPFKRQVTVRKYIA
EQIIFWIGSFAMFLCWELSHHLHRVLHTKRFTFAPPKGSAAAETNPSEHLLAALEERNGS
SLLQYLAYLDLCMVCENNVDTWRRAAFFEETGETYKRVTAVCLRPLEELALKLAEGLESK
VDKTSQLSNQLLSPADSRLESKHWEPLNNFQLCAWCARTVASLTAGSHTEDRCGVAQLSG
SNADVISTLLSCLLAVETFMGKKTHLQSPSHLMGPAGIKWATSSTRRIEGAVGKKRGGPL
HSKAYAVADVLRTSIYSIVSAFHDEMLSSAKAGLLEKDWIISGKPLFGTRELLLQKLRLF
LDFRAS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaacatcaccagaaatgattgtcaagaaccggttcctagggttcctcatatgg
cagtccattccctccactgccatcttcatcctcttcaaaacattcatctccaccatcacc
accagtacttctacttctagtagtagtagcagaaacccattactctcttatgccccgtcg
ctcattaccctcctcaccttcttcactttccacctctcacagctcctcttctctgcctct
ctctcactcgtctcctccccccacccccaccgtccggcctacccttttgagctcatactc
ggtctcgtccgctttcttcttgtctcggactcatcatcggcatcggtgcccgtcgatttt
cgcttccgggctaaggtttctttgagctttgtgttgtttgtggcggcttgtgctgtatca
ggatcgctgggaatggtttcgatgtgctgggtgaaatcgagcagctttgatgttgagtgg
gtgattcgaggttttggggttggattgctttacgggttggtttatgtttacaagcgcaga
tgggttttggagtttcccattattcagcgtccacccttcttcagcttcaagatggggctc
ccttcagctactacatgcgcttttgcgctttcgggtgtggcttaccttttctcagctgtt
ctaggagcaattctcccagatccctttaagaggcaggttacagtgagaaagtacattgct
gagcagatcatcttttggattggaagttttgcgatgtttctctgctgggaattaagtcat
catttacatcgggtgctacatacaaagaggttcacatttgcaccacccaaaggatctgca
gcagcagaaacaaatccaagtgagcatctccttgcagctctggaggagaggaatggaagt
tctcttctacagtatcttgcttatcttgatctgtgtatggtttgtgagaataatgttgat
acgtggcgacgagctgccttttttgaagaaactggtgagacttacaaaagagtcaccgct
gtatgcttgaggcctctggaagagcttgcattaaagttggctgaaggtttggaaagtaaa
gttgacaaaacctcccaactatccaatcagttgctctcaccagctgactcacgtctagaa
tctaagcattgggaaccactgaacaacttccagctatgtgcgtggtgtgccaggacggtt
gcctcgctaactgcaggctcgcatacggaggacaggtgtggggttgctcagctctctggt
agtaatgctgacgtcatctcaacactgttgtcctgcctccttgctgttgagacattcatg
gggaagaagacccaccttcaatccccctcacatttgatggggccggctggaattaaatgg
gcaacatcaagcacaagaagaatagaaggtgcagtgggtaaaaagagaggtgggcctcta
cattcaaaagcatatgctgttgctgatgttttgaggacctcaatctacagcattgtatct
gctttccacgatgagatgctgagtagtgctaaagcaggtcttctagagaaggattggatc
atcagcggcaagcctcttttcggcacccgtgagctcctactgcagaagttgcgtcttttc
ctggattttcgagccagttaa
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