Corylus avellana (European hazelnut): 132170968
Help
Entry
132170968 CDS
T09426
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132170968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132170968
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132170968
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
132170968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
132170968
NCBI-ProteinID:
XP_059438119
LinkDB
All DBs
Position
ca2:13231594..13235028
Genome browser
AA seq
326 aa
AA seq
DB search
MREIQLSLNKTQKIRLQRALEKLESLSSKVNANASVTIADSIPVSYEDGVLKGHGTLDLN
GEVVATVCGVVERVNKLVYVRTLRARYKPEVGDIVVGRVSEVAPKRWRLDINYSQNAVLM
LSSMNLPDGIQRRRTALDELNMRSIFEEDDVICAEVRGLQHDGLHLQARSQKYGKLERGQ
LLTVPPYLVKRRKQHFHHLEQYGVDLILGCNGFIWVGEHVEAKDDMVEDQVNKPKLQNIK
SNSYSGTLEEQERTYTPIETRQNICRIANAVRVSAILGFNITAEVIMETVNLSSSLNLDI
HEMLGSEFCVLVAEGEAERRSINKKG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatacagctttcgttgaacaaaacgcagaaaatcaggctccagagagctctg
gaaaagctcgagtctttgtcttcaaaggtcaatgccaacgcctctgtcaccatcgcagat
tccatccctgtcagctacgaggacggcgtcctcaagggacatggaaccttggacctcaat
ggggaagtggttgcgacggtctgtggtgtggttgagcgcgtgaacaagctcgtatatgtc
cgcacattgcgggccaggtacaagccggaggtcggagatatcgttgtagggcgtgttagt
gaggttgctccaaagcgttggagattggacataaattatagccagaatgcagttttgatg
ctttcttcgatgaacttacctgatggtatccagaggcggcgaactgctttggatgaactc
aacatgcgcagtatttttgaagaggatgatgttatttgtgctgaagtccgtggtttacag
catgatggcttacacctccaagcaagaagtcagaagtatggcaagcttgagaggggtcaa
ctgctcactgttcctccttatcttgtgaagagacgaaaacagcatttccaccatctagaa
cagtacggagttgacttaatactaggctgtaatggattcatctgggttggtgaacatgtt
gaagccaaagatgatatggtagaggatcaagtgaataaacctaaattgcagaatattaaa
tctaatagctattcgggaactcttgaggagcaagaacggacctacacgccaatagagacg
aggcagaacatatgtaggattgcaaatgcagtccgggtatcggctattttaggcttcaat
ataactgcagaagtgatcatggagacagttaacttgagtagctctctgaatctggatata
catgagatgcttggttccgagttctgtgttctggttgcagagggggaggctgaaaggaga
agcataaataaaaaggggtga
DBGET
integrated database retrieval system
