Corylus avellana (European hazelnut): 132171089
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Entry
132171089 CDS
T09426
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132171089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132171089
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132171089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132171089
NCBI-ProteinID:
XP_059438293
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All DBs
Position
ca2:complement(49852852..49857628)
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AA seq
479 aa
AA seq
DB search
MRMEMEPGKLFIGGISWDTNEDRLREYFQSFGVVVEAVIMKDRATGRARGFGFVVFADPA
VAERVVMEKHVIDGRTVEAKKAVPRDDQNILNRNNSSIHGSPGPARTKKIFVGGLASTVT
ESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLYKTFHELNGKMVEV
KRAVPKELSPGPSRGQLGGYNYGLSRVSSFLNGYTPGYNPSSVGAYGHRLEGRFSPVTVG
RSGFPPFSPGYGTGLNIEPGLSPSYGGNANLNSDLGFGRGLNALYTGNSNRNVNHISYGG
GNGGNGSILSSASRNLWGNESLNYSTNSSNPSALLGSRSGNSGIGSFANIEALWSSSPNS
GQGGGAGSTYGSGNLGYASGEVSFGSGAVGYGRNSGTGVAPTSSYASNGGYSGSYEELYE
GGLFYGDQTWRSSPSELEGSGSFGLGLGNAASDVLSKNSGGYGGVYSVTNRQSNRGIAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggaaatggagcctggcaaacttttcattggtgggatatcttgggacacaaat
gaagaccgtcttagagagtatttccagtcttttggagtagtagtggaagctgtgataatg
aaggatcgggccacgggccgtgcccgtggttttggttttgttgtttttgcagaccctgct
gttgcagaaagagttgttatggaaaagcatgtgatagatggtagaactgttgaagcgaaa
aaagctgttcctagagatgatcagaacattcttaacagaaacaatagcagcattcatggt
tctccaggtcctgcccgcactaagaagatatttgtaggaggcttagcatccacagtcaca
gagagcgattttaagaagtacttcgatcagtttgggacaattacagatgtggtggtgatg
tatgaccacaatacacaaaggccaagaggatttgggttcattacctatgattcagaggaa
gcagtagagaaagtgttgtacaaaacctttcatgaactcaatggtaaaatggttgaagtt
aaacgagctgtccccaaagaattatctccagggccaagtcggggccaattgggtgggtat
aactatggtctgagtagagttagcagcttccttaatggttacactccgggatataaccca
agctcagttggggcgtacggacatagattggagggtagatttagtccagttactgttggt
cgtagtggatttcctccattcagtcctggatatgggacaggactgaatattgagcctgga
ttgagtccaagctatgggggaaatgcaaaccttaattctgaccttggctttggacgggga
ttgaacgctttatacactggaaattcaaataggaatgttaaccacatcagctatggtggt
ggtaatggaggaaatggttcaatcttaagttcagcgagccgtaatctgtggggcaatgag
agtcttaattactctactaactcctcaaaccctagcgctttactgggctctagaagtgga
aattcaggaataggttcttttgccaatattgaagcactctggagttcctctcctaactcg
ggtcaaggcggaggtgctggttctacctacggtagtggcaatcttggttatgccagtgga
gaagtcagttttggttcaggagcagtagggtatggaagaaacagtggaactggtgttgca
ccaacctcatcatatgcatcaaatggtggttacagtgggtcttatgaagaactttatgaa
ggtggtttgttttatggggaccaaacttggcgatcatcaccttcagagctagaggggtct
ggttcatttggtcttgggcttggaaatgcagcttcagatgttttaagtaagaactctggt
ggttatggtggtgtttacagtgttaccaatagacaatcaaatagaggaattgctgcatag
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