Corylus avellana (European hazelnut): 132171108
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Entry
132171108 CDS
T09426
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132171108
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132171108
BRITE hierarchy
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GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Cullin_Nedd8
DUF2586
Motif
Other DBs
NCBI-GeneID:
132171108
NCBI-ProteinID:
XP_059438317
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Position
ca2:complement(39119763..39121699)
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AA seq
551 aa
AA seq
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MTSASRGCTGCRSNSFERDDVRCHLICSACGLIQDYDGYDAQLGGINGPEGTFVRVGTAG
TGTVYTYKQRKVFGAQKLMDELIGRLGLSDSPKADHVKTMVANITEKEFGEGNWFPILIG
ACAYVVMRKDNKPLPIAEVASVICSDIYELGRMVARVVDFLDLKGPEKFPEFDIVWSFKR
AVRNSSTLSSVESDTLEIMRKQGIFLIQCAVKWFLTTGRRPMPVVAAVLALVAELNGVNM
GIEDAAKEVHANVSTSRLRYREFLEKLVKVAGVLPWGEDVTVKNVVKSAPFVIEYMERKS
MEMPDSKKRKKVDGVIGVDLGDVVSECLRKDVEYGTDGYGVEGDSKCFEVEQNGGIVRAG
DDDDDSDRMKLSHESLSLMYEEFLDKMRHKKSTEGSAEIRGKKRIGFKHHACMDWWNGKS
DLSKKLLLKQILEKDVGLDPLPPSFVTGCRVYTRRREKINAAKARINRVMHPSRTDLGES
GDSCSFDSVHAKKKRNRRQANDIDWEDFIIETLLLHEVKEEEIEKGHYNTLLDLHVFNSG
VLPEVLPWKAK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcctcacggggctgcaccggttgccgtagcaattccttcgagcgtgacgac
gtgaggtgtcacctgatctgctcggcatgcgggctcatccaggactacgacggctacgac
gcgcagctcggcggcatcaacggtccggagggcaccttcgtccgcgtcggcaccgcaggt
acgggcactgtttacacttacaaacagaggaaagtcttcggggcccaaaaactcatggac
gagctcatcggtaggctaggcttgtccgattccccaaaagccgaccacgttaaaaccatg
gtcgccaatataaccgagaaggaattcggagagggcaattggttcccaatcttaatcggc
gcttgcgcctatgtagttatgcgaaaagataacaaaccgttgccgattgccgaggtggcc
tcggtcatctgctccgatatctacgagttaggtagaatggtggcgcgtgtagtcgatttc
ttggatctgaaagggccggagaagtttcctgagttcgatattgtatggtcgttcaaacgg
gcggtgaggaatagctcgaccctttcgagcgtagagtctgatacgttggagataatgaga
aaacaggggatttttttgatacagtgtgctgtaaagtggttcttgacgacagggcggagg
ccaatgccggtggtggcagcagtgctggctctggtggcggagttgaatggggtgaatatg
gggattgaggacgcggcgaaggaggttcacgccaatgtttcgacgagtaggttgaggtat
agggagtttttggagaagctggtgaaggtggctggggttttgccttggggtgaagatgtc
acagtcaagaatgtggtcaagagtgcgccatttgtgattgagtatatggagaggaagtca
atggagatgcccgatagcaagaagaggaagaaagtagatggtgttattggggttgatttg
ggagatgtggttagcgagtgtttgaggaaagatgttgagtacgggactgatgggtatggt
gtggagggtgattctaaatgttttgaggttgaacaaaatggtgggattgtgagagcaggg
gatgatgatgatgattcggataggatgaagctctcacatgaatccttatccttgatgtac
gaagaatttttggataagatgcgtcacaaaaaatccacagaagggagtgctgagattcgt
ggaaagaagaggataggatttaagcatcatgcatgtatggattggtggaatgggaaatca
gacctgagcaaaaagcttttactgaagcaaatattggagaaagatgtaggattggatcct
ctgcccccatcttttgttactggttgtagggtttatacgaggaggagagaaaagataaat
gctgctaaagcacggattaatagagttatgcatccatcaagaaccgatttgggtgagagc
ggtgatagttgctcttttgattctgtacatgccaagaagaagagaaatcgaagacaagct
aatgatattgattgggaagattttattattgaaactctcctcctccatgaagtgaaagag
gaggaaattgagaaggggcattacaataccttgctcgacttgcatgtgtttaacagtgga
gttttgccagaggttctgccatggaaggcaaaatag
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