Corylus avellana (European hazelnut): 132171120
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Entry
132171120 CDS
T09426
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132171120
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132171120
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132171120
Protein phosphatases and associated proteins [BR:
cave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132171120
Spliceosome [BR:
cave03041
]
Common components
Common spliceosomal components
SR proteins
132171120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132171120
NCBI-ProteinID:
XP_059438332
LinkDB
All DBs
Position
ca2:complement(1265840..1269711)
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AA seq
248 aa
AA seq
DB search
MADSPRKRYSQSPSPIRAQSRSRSRSRPRSRSRSWSRPRSRSRSRSWSRPRPRSRSRSRG
RSRSRSHGRTEIVNPGDTLYVTGLSQRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGF
AFVTMENVDDANRCVKYLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNTRDYGPRGD
RGDRGDRGRYRGRDDYGYRRSPRRSPYRGVRDYSPRHSPPHGGRSRRDRSRSVPYSPSPE
RKYARGSR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctcctcgcaaaaggtattcgcagtccccttcccctattagagctcagtcc
aggtcccgatctagatctagacccagatccagatccaggtcttggtctagacctaggtct
aggtccagatctagatcctggtccaggccaaggcccagatcccggtccagaagtcgtggc
aggtcgaggtccagaagtcatggcaggactgagattgtaaaccctggggataccctttat
gtaactggcctctcccaaagggtcacagagagggaccttgaagagcacttctctaaggag
ggaaaggtagcttcctgttttcttgtggtggagcctcgtacgcgtatctcacgtggtttt
gcttttgttacgatggaaaatgttgacgatgccaaccgttgcgttaaatatctcaaccaa
tcagttcttgaaggtcgttatataactgtagaaaagtcacggaggaaacgagcaagaact
cctacaccaggacactatcttgggctgaaaaataccagagactatggccctcgtggcgac
cgtggcgaccgtggtgaccgtggtagatatcgtggacgtgatgactatgggtatcgtaga
tctccaaggcgctcaccgtatcgaggggttcgtgattattctccaagacactcaccaccc
catggtggaagatcaagaagggacaggtccaggtcggttccttattctcctagcccagaa
aggaaatatgctcgtggttctagatga
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