KEGG   Corylus avellana (European hazelnut): 132171147
Entry
132171147         CDS       T09426                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03020  RNA polymerase
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132171147
  09124 Replication and repair
   03420 Nucleotide excision repair
    132171147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cave03021]
    132171147
   03400 DNA repair and recombination proteins [BR:cave03400]
    132171147
Transcription machinery [BR:cave03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132171147
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132171147
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 132171147
NCBI-ProteinID: XP_059438371
LinkDB
Position
ca2:50624270..50627402
AA seq 243 aa
MEKGGKGFSLPPQTARKSSLKSNPQGVASLKGKDDSSTKSKRGKKVQFNFEGSPEANFSP
KSGGKDETTFPKGDSSKWGKSDKTSTGGKNSISKEPQPLEFKIEQELPENAKCMMDCEAV
DILQGIKDQMVILTRDPEFRLPVSFDKGLQYAKRGGHYTNPQLVRQVLETLTKYGVTDGE
ICLIANVCPESVDEVFALVPTLKPKRTKLSEPLQDVLSELAKLKESASLESQMERAQVDI
PDN
NT seq 732 nt   +upstreamnt  +downstreamnt
atggagaaaggaggaaaagggttctctctgcccccgcaaacagcacgaaaatcttcactc
aaatctaaccctcaaggtgtagcatcgttgaaagggaaggatgatagctcaacaaagtca
aagaggggaaagaaagttcagttcaattttgaaggttcacccgaagctaatttctcacca
aaatctggtgggaaggatgaaactacatttccaaaaggcgattcgagcaaatggggaaaa
agtgacaagacttctactggtggaaaaaattcaatttctaaggaaccacaaccactggag
ttcaaaattgagcaggaactcccagagaatgccaaatgcatgatggattgtgaggctgtt
gatattttacaaggaatcaaggatcagatggtcatattaacaagagatccagaatttaga
ctccctgtatcatttgacaaagggctgcagtacgccaaaaggggtggccattacacaaat
ccccagcttgttagacaagttcttgagactctcacaaaatatggtgtcactgatggcgag
atatgcctgattgccaatgtttgtccagaatctgttgatgaagtttttgctctggtccca
accttgaagcctaagaggactaagctcagcgaacccctccaagatgtcctaagtgagcta
gctaagttaaaagagtctgctagcttagaaagtcaaatggaaagggcacaagtcgacatc
cctgataattaa

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