Corylus avellana (European hazelnut): 132171163
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Entry
132171163 CDS
T09426
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132171163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132171163
03400 DNA repair and recombination proteins [BR:
cave03400
]
132171163
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
132171163
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
132171163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
132171163
NCBI-ProteinID:
XP_059438388
LinkDB
All DBs
Position
ca2:16043895..16051061
Genome browser
AA seq
1220 aa
AA seq
DB search
MESNSPSTAFLDVRFVLFGFDPVNENKVRGRLVYGGGVDAGQYSQSCTHVIVDKLVYDDP
VCIAARNDGKTLVTALWVDHSFDVGMPVDSTSIMYRPLKDLNGIPGAKNLVICLTGYQRQ
DRDDIMVMVSLMGARFSKPLVANKVTHLICYKFEGEKYELAKKVKMIKLVNHRWLEDCLR
DWELLPEDNYYKSGYDLEMMEAEAKDSEEEAEDTTVKQFLGRNMNKSPHNSKIGVPTTSE
LPTSVGELSPAPKGPLNVESTTVMLFTPGKEKTSGQASSSDNVDVSKALGCQNTNSGELP
DLLDQNLDPMTVDNGLTSTSRNGKRPIHSDATISPLSDSMKTSRRSSLPMYSGEMPGKLS
DHSKAHLGEVSDDFENFPFRAKAKDSFGSGCLQTSREGTDLVHGKESSGLLPQKRMANAT
YVSFKSPKVSIDSKPCTATSPVAGDKTQGLEPTFLIDGPHGASSHFLLGNDGLRMDKTPN
LNAAQTSNANISTTEPSTCSKKSLTSDVPSSETVTAKNGQDNDAYEKTPQSSFQRLRQPA
LSTKPDIVDLGMGKSALEVGEKGEPENEQQQDIESSAIKKKLATEKSDGPCNASLPGGND
NLITQPLRKKTVAKKTLGSRPKSTANIQKGPVYVNKTTSHDAAAIHSDEVKKTADHEKSP
PTVNTEALKEVQTENVMKSGDYMENRNESMGDETEAPENKVEDELEKPLNEQKPGVVILT
DKADTIMEENLEMVQHITNDYNTSMHDDAMASEEGANGIELEKTVCHKNVELASTSLDLD
GLKGKVNKGKKRPIGRTKMKMDVMKSKKVVDGEGSGTENNEGTGTEKEKRVLLPSGKTKS
CPVLTNESENRCEGEKENKPVKDLSQGKECVRKPSVKSNIMPRKINQKAGKVNQKSSTSV
GEYPYGEKTEPTWFILSAHRLQRKEFQQVIRRLKGRLCRDSHQWSYQATHLITTDPIRRT
EKFFAAAASGRWILKTDYLTACSQAGRFVAEEPYEWHKNGLSEDGAINLEAPRKWRLLRK
RTGHGAFYGMRVIIYGECIAPPLDTLKRAVKAGDGTLLATSPPYSRFFKSGVDFAIISPG
MPRVDLWVQEFLKHEIPCVAADYLVEYVCKPGYSLERHVLYNTNAWAEKSFASLQSKGEE
IVEDLTPPDDHGSNDIACQVCGSCDRGEVMLICGDESGSVGCGVGTHIDCCDPPLQGVPE
DDWFCAKCSQSRHSTTSGKK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaattccccttccactgcgtttctcgacgtccgtttcgttctcttcggattc
gatcccgtcaatgaaaacaaggttcgaggtaggcttgtttatggcggtggagttgatgct
ggtcagtatagccaaagttgtactcatgtaattgtggataagcttgtttatgatgatcct
gtgtgtattgctgcacggaatgacggcaagacgctcgtcacagccttgtgggttgatcat
agttttgatgttggaatgcccgttgattccacttcgattatgtacaggcctctcaaggat
ctgaatgggataccgggtgcgaaaaatttagttatatgcttaaccggatatcagcggcaa
gatcgagatgacattatggttatggtcagcttgatgggtgctaggttctctaagccattg
gtggcaaacaaggttactcatctcatttgctataaatttgagggggagaagtatgaactt
gccaaaaaagtcaagatgataaagcttgtcaatcatcgatggttggaagattgcttaagg
gattgggaacttcttccagaagataattattacaagagtggctatgatttggagatgatg
gaagcagaggctaaggattctgaagaagaggctgaagacactacagtgaagcaatttttg
gggagaaacatgaataagagtcctcataattcaaaaattggggtaccaacaacctctgaa
ttgcccacatcagttggtgaactctcacctgctccaaagggtccattgaatgttgaaagt
acaacggtcatgttattcactcctggaaaagagaaaacatctggtcaagcatcaagctct
gataatgttgatgtttctaaagcgcttggctgtcagaatactaattctggcgagctacct
gatctgcttgaccaaaatctagatcctatgacagtcgacaatggtttgacatctacctct
agaaatggtaaaaggcccattcattctgatgccacaattagtcctttaagtgactcgatg
aaaacttcaaggaggtcctcacttccaatgtactctggagaaatgccaggcaaattaagt
gaccattctaaagcacatttgggtgaagtcagtgatgattttgagaactttcccttcaga
gcaaaagcaaaggatagttttggctctggttgtcttcaaacttctagggaaggaactgat
ttagttcatggaaaagagtcaagtggtttgttgcctcaaaagaggatggcaaatgctact
tatgttagctttaagtcaccgaaggtgagtattgattcaaaaccttgcacagcaacaagt
ccagtggcgggtgataaaactcagggattggaaccaacatttttgatcgatggcccccat
ggagccagcagccattttctacttggcaatgatggccttcgtatggataagactcctaat
ctgaatgctgcacagacctcaaatgctaacatatcaacgactgaaccctcaacttgtagc
aagaagtctttgacaagtgatgtgccttcctctgaaactgtaaccgcaaagaatggacaa
gataatgacgcttatgagaagacgccccaatcatctttccagagattaagacagcctgcc
ttatccaccaagcctgacattgtagatttaggtatggggaaatctgcacttgaagttgga
gaaaaaggggagccagagaatgagcagcagcaagatattgagtcatctgccattaagaaa
aaattggcgactgagaaatctgacgggccttgcaatgcaagcttgcctggaggaaatgat
aacttgataacacaaccacttaggaagaagacggttgccaaaaagactttgggttcaaga
cctaagtcaactgctaatatccaaaagggtcctgtctacgtaaataaaactacctcccat
gatgctgctgcaattcattcagatgaagtgaaaaagacagcagatcatgagaagtctcct
ccaactgttaatactgaagcactgaaggaggtgcagacagaaaatgtcatgaagtctggc
gactatatggagaatagaaatgaatcgatgggtgatgaaactgaggctccagagaacaaa
gttgaagatgagttggagaagccacttaatgaacagaaacctggggtggttatattgaca
gataaagcagatacaatcatggaagagaatttggaaatggtgcagcatattacaaatgac
tacaacacgagcatgcatgatgatgcaatggcttcagaggaaggcgccaatggaattgaa
ctagagaagactgtttgtcacaagaatgtagaacttgcttcaacaagcttagatttagac
ggtctcaaagggaaagtgaataaagggaaaaaacgccctataggtagaaccaagatgaag
atggatgtaatgaaatctaagaaagttgtggatggtgaaggaagtgggactgagaacaat
gaggggacggggacagaaaaggagaaaagagtgttgcttccttctggtaaaactaagagt
tgccctgttctcacaaatgagtcagagaaccgttgcgaaggggagaaggagaacaagcca
gttaaagatttaagtcagggcaaagagtgcgtcaggaaaccatctgttaaatctaatata
atgccaaggaagatcaatcaaaaggcaggaaaggtgaatcaaaaatcttcaacatcagtg
ggagagtatccgtacggcgagaaaaccgaacctacatggtttatattgagtgctcatcga
ctacaaagaaaggagtttcaacaagttattcggcgtttgaaagggagactttgccgagat
tctcatcaatggtcataccaggctacacacttaataaccacagatccaattcgcaggacg
gagaagttctttgctgccgctgcatctggaaggtggattcttaagaccgattatcttact
gcctgtagtcaggcaggaagattcgtggcagaggaaccttatgaatggcacaaaaatggc
cttagtgaagatggtgcaatcaatttggaggctccaaggaagtggcggctcttgaggaag
agaacaggtcatggtgcgttttatggaatgcgcgttatcatatatggtgaatgcattgcg
cctcctttggatactctgaagcgtgctgtgaaggccggcgatgggaccctattagcaact
tctcctccgtactcccgctttttcaagtctggggtagactttgccattatcagccccggg
atgccacgtgtcgatttgtgggtgcaggagttcttaaaacacgagataccctgtgttgca
gctgattacttggtggaatatgtctgcaagcctgggtactctcttgagagacatgtgcta
tacaatactaatgcttgggcagagaaatcatttgcttccctgcagagcaagggggaagag
attgttgaggacttgacaccaccagatgatcacggtagcaatgatatagcctgccaggtt
tgtgggtcttgtgatagaggggaggtgatgttgatctgcggcgatgaaagtggttctgtt
ggttgtggggttggcacccacattgattgctgtgatcctccacttcaaggtgttccagaa
gatgactggttttgtgccaagtgtagccaaagcagacacagcaccacctctggtaagaaa
tag
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