Corylus avellana (European hazelnut): 132171185
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Entry
132171185 CDS
T09426
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132171185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132171185
03041 Spliceosome [BR:
cave03041
]
132171185
03032 DNA replication proteins [BR:
cave03032
]
132171185
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
132171185
Spliceosome [BR:
cave03041
]
Complex A
U1 snRNP components
Sm proteins
132171185
U2 snRNP components
132171185
Complex B
U1 snRNP components
132171185
U4/U6.U5 tri-snRNP components
132171185
Complex C
U2 snRNP components
132171185
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
132171185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6454
Motif
Other DBs
NCBI-GeneID:
132171185
NCBI-ProteinID:
XP_059438417
LinkDB
All DBs
Position
ca2:complement(18111150..18115632)
Genome browser
AA seq
87 aa
AA seq
DB search
MSIPVNPKPFLNNLTGKPVIVKLKWGMEYKGFLASVDSYMNLQLANTEEYIDGQFTGNLG
EILIRCNNVLYLRGVPEDEEIDDADRD
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccagttaacccaaaacctttcttgaacaatttgaccgggaagccagtcatt
gtgaaactcaagtggggaatggagtacaaaggttttctcgcctcagtggattcatacatg
aacttgcagctggctaacactgaagaatacattgatgggcaattcactggaaatctggga
gagattttgataagatgtaacaatgttctctatcttcgtggggtaccagaggatgaagaa
attgacgatgctgatcgagactaa
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