Corylus avellana (European hazelnut): 132171735
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Entry
132171735 CDS
T09426
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132171735
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132171735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_Aladin
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
132171735
NCBI-ProteinID:
XP_059439109
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Position
ca2:24146821..24153701
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AA seq
526 aa
AA seq
DB search
MDVPPIDKEISEELDLRINKYLRGGAVNLKGLEDKKLRGQLAHRENLFGKSAKAAAKYEK
WLMPSEGGYLEADGPVEKTWRIKQEDIGRAVDISSARNQHDVILPEFGPYTMDFTSSGQH
MAVAGRKGHLAVVDVKNLAVRKEFQVRETVRDVVFLHHQLFFAAAQKKYTYIYRPEGVEV
HCLKEHGAVLRLQYLKNHFLLASINNYGQLHYEDVSMGAMVNNIRTGLGRTDVMRVNPYN
GVVALGHSGGTVTMWKPTSSAPLVKMLCHHGPVSALAFHPSGHLMATAGKDKKIKLWDLR
KFEVLQTFPGHAKTLDFSQKGLLACGTSSFVQILSDLSESRNYSKYMAHSMVKGYQINNV
LFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETNKQRGEKEVHLLLDKLPPET
IMLDPSKIGTVKPARKREKPTKKEREAEMEATLEDVKSNITLKKKTKGRNKPSKRAKKKE
VIVSKAKRSLLEQMHEEPLSRKKQKISEEVALPKSLQRFAHKKAPT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcctccgattgacaaggagatttctgaggagttagatttgagaataaacaag
taccttagaggcggtgctgtgaatttgaagggtttagaagataaaaagctcagaggtcaa
cttgcccatagagaaaacttgttcggaaaatctgccaaagctgctgctaagtatgagaag
tggcttatgccaagtgagggagggtatttggaggctgatggtccagtagagaagacatgg
agaatcaagcaggaagatattgggcgtgcagtagatatctcgagtgcaaggaatcaacat
gatgttattttaccagaatttggtccgtacacaatggattttacctcgagtggtcaacat
atggctgttgctggacgcaagggccacctggccgttgttgacgtgaagaatttggcagta
cggaaagagtttcaggttagagaaacagtgcgtgatgtggtattcttgcaccatcagttg
ttctttgctgctgctcagaaaaaatatacatacatttatcgtccagagggtgtagaagtt
cattgcctaaaggaacatggtgcagtgttaaggcttcagtatctgaaaaatcacttcctc
ttggcatccataaacaattatgggcagctccattatgaagatgtatcaatgggtgctatg
gtaaataatatccgtaccggcttaggccgtactgatgtaatgcgtgtgaatccctacaat
ggagttgttgctttgggtcattcaggtggaacagttaccatgtggaagcccaccagctct
gctccccttgtcaagatgctgtgccatcatgggcctgtttcggcactggcattccatcct
agtggccatctcatggccacagctgggaaagataagaaaattaagctttgggacttgagg
aaatttgaggttctccagacttttccaggccatgcgaagaccttggatttcagtcagaaa
ggtttgcttgcatgtggaactagttcctttgtacagattctatctgatttgtctgaaagt
cgcaattatagcaaatatatggctcattcgatggtgaaaggttaccaaatcaataacgtg
ttgtttcgaccgtatgaagacgttctaggcatagggcattccatgggctggtctagtatt
cttattccaggttctggggaacccaattttgattcttgggtggctaacccatttgaaaca
aacaaacagcggggagagaaggaagtgcaccttcttcttgacaagcttccgccagagaca
attatgttggacccttcaaagattggtacagtgaagccggcaaggaagagagagaagccg
acgaagaaggaaagagaggccgagatggaagctaccttagaagatgtcaagagcaacatt
accctgaagaagaaaacaaagggaaggaataaaccgagtaagagggcgaaaaagaaagag
gtgattgtttctaaagctaaaagatctttgttggagcagatgcatgaagaaccattgtcc
agaaagaagcagaaaattagtgaggaagttgcccttccgaaatctttgcagcggtttgct
cataagaaagcaccaacttga
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