Corylus avellana (European hazelnut): 132172137
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Entry
132172137 CDS
T09426
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03020
RNA polymerase
cave03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132172137
09124 Replication and repair
03420 Nucleotide excision repair
132172137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132172137
03400 DNA repair and recombination proteins [BR:
cave03400
]
132172137
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132172137
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132172137
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132172137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
132172137
NCBI-ProteinID:
XP_059439570
LinkDB
All DBs
Position
ca2:43110281..43118539
Genome browser
AA seq
1192 aa
AA seq
DB search
MEDDQEYDQQVSYDDEEEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYENSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS
TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRETPEDAGWHDL
VAKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGLASRYSRRDHSI
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTMEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAVANLKKNSF
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEPKPSKDQKKKGA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaccaggagtatgaccagcaggtaagctacgacgacgaagaagaggacgag
atcacccaggaggacgcctgggccgttatctccgcctacttcgaagagaagggcctggta
cgccagcagctcgactctttcgacgagttcatccagaacactatgcaggagatcgtcgat
gagtctgccgacatcgagatccgccccgagtcccagcacaacccgggccaccagtcggac
ttcgccgagactatctataagattagctttggtcagatatacttgagcaagcctatgatg
acagagtctgatggagaaactgcgaccttgtttccaaaggctgctaggttgagaaatcta
acatactcggcgcccttgtatgtggatgtctcaaaaagagtcataaagaaagggcatgat
ggtgaagaagtaactgagactcaggatttcaccaaagtatttattgggaaggttccaata
atgttgcggtcaagttattgcacattgtacgagaattccgagaaggatttaacagagctt
ggggagtgtccatatgatcaaggtgggtattttattataaatgggagtgaaaaggttcta
attgctcaggaaaagatgagcaccaatcatgtctatgtgttcaagaaaagacagcctaac
aagtatgcctatgtgggggaagttcggtctatggcggagtctcaaaacagaccccccagt
accatgtttgtgcggatgctctctcggactagtgccaaagggggctcttcggggcagtac
attcgtgccactcttccatacattcgaactgaaattccaattattattgtatttcgagct
ttggggtttgtagctgacaaagacatactagaacacatatgttacgacttctctgatact
caaatgatggagttgctccgcccctccttggaagaagcatttgtgattcaaaatcaacag
gttgcactagattacattgggaaacgaggagcaactgttggtgtaactagggaaaagagg
atcaagtatgctaaagaaattcttcaaaaggaaatgcttcctcatgttggtgttggagag
ttttgcgagacaaaaaaggcttactattttggttatattattcaccggcttctgctgtgt
gcacttggccggagagccgaagatgatagggatcattatggcaacaagaggctggacctt
gctggtcccttacttggaggcctgtttagaatgctattcagaaagttaactagggatgtg
agaggttatgtgcagaagtgtgtagataatggaaaggaagttaacctccaatttgccatc
aaagcaaaaaccatcaccagtggtctcaaatactctctcgccactggaaactgggggcaa
gcaaatgcagctggtacaagagctggagtttcacaggtgttgaatcgcttaacatatgcc
tccacgttgtcacatctaagaagactgaattctcccataggacgtgaagggaaattggcc
aaaccacggcagttgcacaattcacagtggggaatgatgtgtccagctgaaacacctgaa
ggacaagcatgtggactggtgaagaatcttgcattgatggtgtacataactgttggatct
gcagcataccctattttggaatttttggaagaatggggtacagagaattttgaggaaatt
tctcctgctgttattccgcaagctacaaaaatttttgttaatggttgctgggttggtatt
catcgagatcctgatatgttggtgaaaacattaagaaagctgaggcgaagggttgatgtt
aataccgaggttggagtagttagagatatccgattgaaagaactgcggatatatactgac
tatggccgttgcagtcgtccactattcattgtagacaagcagaggcttctcataaagaag
aaggatattcatgcattgcagcagagggaaacccctgaggatgctggttggcatgatctt
gttgcaaagggatttatagaatatattgacacagaagaagaagagacaacaatgatttcc
atgaccatcaatgatcttgtacaagcaaggctaaatccagaggaagcttattctgaaact
tatacccattgtgaaatccacccatcattgattttgggtgtttgtgcttcaattatacca
tttccagaccataatcagtctcctcgtaatacatatcaatcagctatgggtaagcaagcg
atgggtatttatgtcaccaactaccaatttcgaatggatacgttagcttatgttctatat
tatcctcaaaagccacttgttaccacacgagcaatggagcatctccactttaggcagctt
cctgctggcattaatgccattgttgccattgcctgctattctggatataaccaggaagat
tctgttataatgaaccaatcgtctatagaccgtggattctttaggtcactatttttccgt
tcatatcgtgatgaggagaagaagatggggactcttgtcaaagaggattttggacggcca
gacagatccaataccatgggtatgcgccatggctcttatgataaattggatgatgatggc
cttgcacctcctggtacgagagtttcaggcgaggatgtgattattggaaagaccactccc
attgctcaggacgaagctcagggactagcttcacgttattcacggcgtgatcatagcata
agcctgcggcatagtgaaactggaattgttgaccaagttctactgacaacaaatgcggat
gggctaaggtttgtgaaagtaagggtgagatccgttagaattcctcagattggggataaa
tttagcagtcggcatgggcaaaagggaacagtgggcatgacatatactcaagaagacatg
ccgtggaccatggaagggatcacccctgatatcatcgttaatccgcatgctattccttca
cgtatgacaattggtcagctgattgagtgtatcatgggcaaggttgcagctcacatggga
aaggaaggagatgctactcctttcacagatgtcactgtggacaatatcagcaaagctctt
cacaaatgtggttatcaaatgcgtggttttgagaccatgtataatggtcacactggtcga
cgtctcagtgctatgatattccttggccccacttactaccaaagactgaagcatatggtt
gatgacaagatccattcacgtgggcggggccctgtccagatcctgacaaggcagcctgct
gaaggacggtcccgtgatggaggtcttcgatttggagaaatggaacgagattgcatgatt
gcccatggtgcagctcacttcctcaaagagcgattgtttgaccagagcgatgcatatcgg
gtccatgtttgtgaacgttgtgggttgatagctgttgcaaatttgaagaagaactctttc
gagtgcaggggttgcaaaaacaaaaccgacattgttcaggttcacattccttatgcctgt
aagctgctcttccaagagcttatggccatggctatagcaccaagaatgctcacaaaggaa
cccaaaccatccaaagaccaaaagaagaaaggagcctga
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integrated database retrieval system
