Corylus avellana (European hazelnut): 132172227
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Entry
132172227 CDS
T09426
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
cave03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132172227
09124 Replication and repair
03420 Nucleotide excision repair
132172227
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cave01001
]
132172227
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132172227
03019 Messenger RNA biogenesis [BR:
cave03019
]
132172227
03400 DNA repair and recombination proteins [BR:
cave03400
]
132172227
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
132172227
2.7.11.23 [RNA-polymerase]-subunit kinase
132172227
Protein kinases [BR:
cave01001
]
Serine/threonine kinases: CMGC group
CDK family
132172227
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132172227
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
132172227
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132172227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
UBA_HYPK
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
132172227
NCBI-ProteinID:
XP_059439673
LinkDB
All DBs
Position
ca2:complement(36338538..36358814)
Genome browser
AA seq
415 aa
AA seq
DB search
MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQKVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMT
LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP
ELLFGTKQYGAGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTASQWPDMP
YLPDYVEYQYVPAPPLRSLFPMASDDCLDLLSKMFTYDPKARISVQQALEHRYFSSAPLP
TVPDKLPRPAPKRESRASDFNSHDGPTVLSPPRKSKRVMPEREGFEGNAYKVHKIDDHVD
EIRLAAGGNTSGNEPVPLSVDFSIFGAKPPNRPTINSTDRTHLKRKLDLEFQHPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctcgatctgtccaagaaagtcgccgataggtatctgaagcgcgaagtcctc
ggagaaggtacctatggggtcgtctacaaggccattgataccaagacaggacagaaagtt
gcgattaaaaaaatccggcttgggaagcaaaaggaaggggtaaattttacggcacttagg
gaaattaaactgcttaaagagctcaaagatccgaatataattgagttgattgatgcgttc
cctcataagggtaacttgcatctcgtgtttgagttcatggagacagacctcgaagctgtt
attcgtgaccgaaatatatttctttcaccgggtgacataaaatcgtaccttcagatgact
ctcaaaggacttgcttattgccacaagaaatgggttttacatagggatatgaaaccaaac
aacttgttaataggatctaatggacagctcaaacttgcagattttggtttagcacgaata
tttgggagcccagatcgcaagtttacgcatcaggtctttgctcggtggtatagagcacct
gagctgttgtttggtaccaaacaatatggtgctggggtggatgtttgggctgcagcttgt
atatttgctgaacttctgctgcgtcgacctttcctgcagggttcaagtgacattgatcaa
ttaggaaagatctttgctgcatttgggactccaacagcttctcagtggcctgacatgcca
tatcttcctgattatgtggagtaccaatatgttcctgcaccccctttacgttctctgttt
ccaatggctagtgatgattgtctagatctgttatcgaaaatgtttacttatgatcctaaa
gctagaatatcagtgcagcaggcattagagcatcggtacttttcatctgcacctctgcct
acagttccggataaactccctagacctgctcctaagcgggaatctagagcttcagatttt
aattcacacgatggtcccaccgtcttatcacctccaagaaagtccaagcgagtaatgcca
gaacgtgagggctttgaaggaaatgcatacaaagttcataagatcgacgaccatgttgat
gaaataagactggcagctggtggaaatacaagtgggaatgagccggtacctctgtcagtt
gatttttctatctttggagcaaaacctcctaacaggcctacaattaacagtactgacaga
acacatctaaaaaggaaattagatcttgaattccaacaccccgaatga
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