Corylus avellana (European hazelnut): 132172562
Help
Entry
132172562 CDS
T09426
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Module
cave_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132172562
Enzymes [BR:
cave01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132172562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
132172562
NCBI-ProteinID:
XP_059440070
LinkDB
All DBs
Position
ca1:41961531..41963759
Genome browser
AA seq
429 aa
AA seq
DB search
MALLHAHALFLIFTVFIIITSFSSETSCFRLHDSRAYTTSRIVSIPSTSTSTSPPNPELL
NVDAFGAKGDGGDDTQAFKKAWREACSSKDSVLVVPQNRSYHLKPITFKGPCNSNFTFKV
YGTIKASPRKSDYQKHKRQWLVFQNVQNFTVEGGGTGTINGNGKRWWNNSCKINKTLPCT
HAPTAVTFLNCNNLTVDNLRIKNAPQMHLTFQRCSNVKASRLVVTAPGHSPNTDGIHVTE
TQNIHIQNCIIGTGDDCISIVSGSENVEATDITCGPGHGISIGSLGASGSSDYVSNVLVD
RAILSGTTNGLRIKTWQGGSGYAKNITFQNVEMHSVQNPIIINQYYCDKKEPSCSEQASA
VKVSNIVYKNITGVSASEEAINFKCSKSFPCREIWLEDVNLAYQEDESVKASCESVKYLT
NQGNVSPSC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcttcacgcccacgccctttttttgattttcaccgttttcatcattataacg
tctttctcatccgaaacatcctgttttcggcttcatgattcccgcgcctatactacttca
cgcatagtaagcatcccttcaacttcaacttcaacttcaccaccgaatccggagctgctt
aatgtagatgcctttggcgctaaaggcgatggaggagatgatactcaggcatttaagaaa
gcatggagagaggcttgttcttcaaaagatagcgttcttgtggtacctcaaaataggagc
tatcatctcaagccaattacattcaagggtccttgcaattctaatttcacattcaaggtc
tatggaacaatcaaagcttctcctcgtaaatcagattatcaaaaacataaacgacaatgg
cttgtgttccaaaatgttcaaaattttactgtcgaaggtgggggcacgggcaccatcaat
ggcaatgggaagagatggtggaataactcatgcaaaatcaacaaaactctgccttgcacg
cacgcaccaaccgccgtgactttcctcaactgcaacaatttgacagtagataacttgcgg
atcaaaaacgcaccacaaatgcatctcacgtttcaaagatgctcaaatgtcaaagcttca
cgtctcgtggtaactgcaccggggcatagtcccaacaccgatggaattcatgtcacagaa
acgcaaaacattcatattcaaaactgcattatagggacaggggatgattgtatttcgata
gtaagtgggtctgaaaatgttgaagccacagatattacctgtggacccggccatggaatc
agcataggaagtttgggtgcgagcggttcaagtgactatgtttcgaatgtgttggtcgat
agagcgatactatcaggaaccacaaatggattgagaataaaaacatggcagggcggctct
ggatatgccaaaaatattacatttcaaaatgttgaaatgcacagtgtccaaaaccctata
atcataaatcaatattattgtgataaaaaagaaccttcatgctcagaacaggcttcagca
gtcaaagtaagcaatattgtttacaaaaacatcacaggtgtcagcgcatcagaggaagcc
ataaacttcaagtgcagcaagagttttccatgtcgtgaaatttggttggaagacgttaat
cttgcctaccaagaagacgaaagtgtcaaggcttcttgtgagagcgttaaatatttgact
aatcaggggaacgtctctccttcgtgctag
DBGET
integrated database retrieval system
