Corylus avellana (European hazelnut): 132173440
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Entry
132173440 CDS
T09426
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132173440
Membrane trafficking [BR:
cave04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
132173440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
132173440
NCBI-ProteinID:
XP_059440926
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All DBs
Position
ca3:complement(9038791..9047753)
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AA seq
1410 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVDDEFGPPATTGSNPPLADGSDSDDAKAFANLSVGEGGH
AFDDFGAEGEKDCVDAGAESVGAHSEERNSLVSSNSIGCDSVLESSNNGIGSEFPSDSSV
SKSSGSGGLAVKEVGWNSFHADSDSAQNGNKRVGSYSDFFSELGGGSGDLPGNEGDKLNK
EAKIESAKGECVADGVNNSVNYANYQEGQVYGASLEQSTNVQDLNSSQYWDNLYPGWKYD
QNTGQWYQVDGYDATAVADVHDSASDWGAVSDRKTEVSYMQQAAQSVVGTVTETSTTESV
FSQGNNGYPDHMVFDPQYPGWYYDTIVQEWRTLDTYNSSIQSTALTQDQQQQHQNGFVSP
GSFNQMNDSLYGEYGQADNYASQGFGSQGQDGSWAGAYSNNNQQDLSTWATETVPKSEAF
LTLGGNQQFDNSYSSKASVNIDQQEPFNSFGAVSIYNGGSQSHGQANGTFEFKSFVPDGN
FNQQFSQPNLKPNKQTKFSNDYFGSQKTVGYSQQSFENGHQTSYAPNVGRSSAGRPPHAL
VTFGFGGKLIVMKDNSPLSTSSYGSQDPVGGSISVLNLLEVVMGNTDPSALDXGASGYFH
TLCKQSFPGPLVGGSVASKDLNKWIDERITGCESPDMDYRKGEVLRLLLSLLKIACQHYG
KFRSPFGADTILRENDSPESAVAKLFASAKRNGAQFGEYGALSHCLQKLPSDGQIKATAS
EVQNLLVSGRKREALQCAQEGQLWGPALVLASQLGDQFYVDTVKQMALRQLVAGSPLRTL
CLLIAGQPAEVFSSYSTGDPGLPGDVNLHQQPAQIGANCMLDDWEENLAVIAANRTKDDE
LVIIHLGDCLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAI
QRTELYEYSKVLGNSQFILLPFQPYKLIYAHMLAEVGKVSDSLKYCQAVLKSLKTGRVPE
VETWKQLVLSLEERIRTHQQGGYTANLAPGKLVGKLLNFFDSTAHRVVGGLPPPAPSTSQ
GSVPGNEHYQQPTGPRVSTSQSTMAMSSLMPSASMEPISDWTADGNRMKMANRSVSEPDF
GRTPRQDQVDSSKEMTSTNEQGKASAGASRFAPFGFGSQLLQKTVGLVMRPRSGRQAKLG
EKNKFYYDEKLKRWVEEGVEPPAEEAALPPPPPTTAAFQNGMSDYNLKSALQKEGIPTNQ
SLDYRSPTPSEHSSGIPSIPSSSNQFSARGRMGVRSRYVDTFNQGGGKPATLFQSPSVQS
VKPSVSANAKFFIPAPASSGGEETMGAIAENGQEETTTNEDPSTSIRNDSFQSPVPPSSM
TIQRFPSMGSVPGKGAVTNGMVPLSSHSRRTASWGGSLSDPFSPPNAAEIKPLGEALGMP
PSSFMPNDPTLMRMPMSGGSFGDDLHEVEL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttcaggtggaggatcagacggacgaggatttcttcgataaa
ctggtcgacgatgagttcggtcccccggccaccacgggatcaaaccccccgttggctgac
ggcagcgattccgatgacgcgaaggcgttcgcgaatctgagcgtcggtgaaggtggacat
gcatttgacgatttcggagcggaaggagaaaaggactgcgtggatgccggggcagagtcg
gtgggcgctcactcggaggagaggaattcgttggtttcgtcgaattcgattggatgtgat
agcgtattggagtccagtaataatgggataggatctgaattcccgtcggattcatctgtg
agcaagagcagtggatccggggggttggcggttaaggaggttgggtggaattcgtttcac
gcggactcggattcggcacagaatggcaacaaacgggtcggttcctactcagattttttc
agtgaattgggaggcggttccggtgatctcccggggaatgagggcgataagttgaataag
gaagcgaaaattgagtcggccaagggtgaatgtgtagctgatggtgtgaataattcggtt
aattatgcaaattatcaggagggtcaagtttatggtgcgtcccttgaacaaagtacgaat
gtgcaggatttaaatagtagtcagtattgggataatctctatccggggtggaagtatgac
cagaataccgggcaatggtatcaagtggatggttatgatgcaacagcggtggcagatgtt
catgattcggccagtgattggggtgctgtttctgataggaaaacagaggtttcttacatg
cagcaggctgctcagtctgttgtgggaactgtgactgaaactagcacgaccgagagtgta
ttttcgcaagggaataatgggtacccggatcatatggtgtttgatcctcagtaccccggt
tggtattatgacacaattgtgcaagagtggcgcacattggacacatacaattcgtccatt
caatcaacggctctgacccaagatcagcagcagcagcatcaaaatgggtttgtttcacct
ggtagttttaatcagatgaatgatagcttatatggtgagtatgggcaagctgacaattat
gcgtctcaaggttttggtagccaaggccaagatggaagctgggccggggcttatagcaat
aataatcagcaggatctgagtacgtgggcaactgaaactgttccgaagagtgaggctttt
ttgactttgggtggaaaccagcaatttgataattcttatagttctaaggcttctgtaaac
attgatcaacaggagcctttcaattccttcggagcagtttcaatttacaacggagggagc
cagagtcatggtcaggctaatgggacttttgaatttaaaagctttgtccctgatgggaac
tttaatcagcagtttagtcagccaaatctgaagccaaataaacaaacaaaattctcgaac
gattattttggcagtcagaaaaccgttggttattcccagcaatcttttgagaatgggcat
cagacttcttatgctcccaatgtaggaagatcatctgctgggcgtcctccacatgccctg
gtaactttcggttttggtggaaaactcattgtaatgaaagataatagtcctctcagtacc
tcgtcgtatggaagccaggatcctgtaggaggctcaatctctgttctaaacttgttggaa
gttgtcatggggaacaccgatccttcagccttggatncaggtgcctctggttattttcat
actttgtgcaaacaatcttttccaggtccattggttggtgggagtgttgcaagtaaagac
ttgaacaaatggattgatgagaggattacagggtgtgaatcacctgacatggattataga
aaaggcgaagtattgaggttgcttctctcattgctcaagatagcttgtcaacattatgga
aaatttcgatctccttttggtgctgacactattttgagggaaaatgattctccagaatca
gcagttgctaaactttttgcatctgctaagaggaatggtgctcagttcggcgagtatggt
gctcttagccactgcttgcagaagttgccttctgatggacaaataaaggcaactgcttct
gaggtacaaaatcttctggtatctggtcgaaagagagaggctctacaatgtgcacaagaa
ggtcagttgtggggacctgcacttgtgcttgcttcacagcttggtgatcagttctatgtt
gatactgtaaagcaaatggctcttcggcagctggttgccggatcacctctccggacttta
tgcctgctaattgcagggcaaccagcagaggtgttttcttcatacagcacaggtgatcct
ggtcttccaggcgatgtcaatctgcatcaacagcctgcacagattggggccaattgtatg
cttgatgactgggaagaaaatttggccgtaatagctgcaaatagaacaaaagatgatgaa
cttgtaattattcatcttggagattgcctgtggaaggaaagaagtgagattactgctgca
cacatctgctatttagttgctgaagcaaacttcgagtcatactcagacagtgccagactg
tgtctaattggagcagatcactggaaatttcctcgaacctatgctagtcccgaggctatt
cagaggaccgagttatatgaatattccaaggtgctcggaaactctcagtttatcctgctg
ccatttcaaccatataaactcatatatgcacacatgctagctgaagtggggaaggtttca
gactctttgaaatactgtcaagcggtattgaagtctctgaagactggtcgagtacccgaa
gtagaaacatggaaacagttagtattatctcttgaggagaggatcagaactcatcaacag
ggtggatacaccgcaaatttggctcctggaaaattagttggcaaattgctcaactttttt
gacagtactgcacatcgcgttgttgggggtttaccgccacctgctccttcaacatcacaa
ggaagtgtcccaggtaacgaacattatcaacagccaaccggccctagagtatcaactagt
cagtcaacaatggccatgtcatcactaatgccttccgcttcaatggagcccataagcgat
tggacagctgatggtaatagaatgaaaatggctaatagaagtgtttcagagccagacttt
ggtagaactccaagacaggatcaggttgattcgtcaaaagaaatgacgtcaacaaatgaa
caaggtaaagcttcagctggggcatcacgctttgctccttttggttttggctcacagtta
ctgcaaaagactgttgggttagttatgaggccccgctctggtcgacaggctaaactcggt
gaaaagaacaaattctattatgatgaaaagttgaagagatgggtagaggaaggtgtagag
cccccagctgaagaagcggccttgccacccccccctccaacaactgcagccttccagaat
ggtatgtcagattacaatttgaaatctgcattgcagaaagaagggattccaaccaatcag
agcctggattacagatctcctacgccttcagaacattcttcaggaatcccatctattcca
tccagctcaaatcaattctcagctcgtggaaggatgggtgttaggtcaaggtatgtggac
acctttaaccaaggtggtggaaagcctgcaaccttgttccagtcaccttctgttcaatcg
gttaagccttctgtgtctgcaaatgcaaagttttttattcccgccccagcatcatcaggc
ggcgaagagacgatgggtgctatagcagaaaatgggcaagaagaaactacaactaatgaa
gatccttcgacatccatcagaaatgactcattccagtcgcctgtacctccatcatcaatg
accattcagcggttcccaagcatgggtagcgtcccaggcaagggagcagtgacgaatggc
atggtccctctctcttctcactcacggcgaacggcatcctggggtggaagcttgagcgat
ccattcagccctcccaatgcggctgaaataaaacctctaggggaggcattgggcatgccc
ccatcttcatttatgcctaatgatcctactctgatgcgaatgccgatgagtggcggcagt
tttggggatgaccttcatgaagtggaactttga
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integrated database retrieval system
