Corylus avellana (European hazelnut): 132173517
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Entry
132173517 CDS
T09426
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132173517
Membrane trafficking [BR:
cave04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
132173517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
bL31_N
Motif
Other DBs
NCBI-GeneID:
132173517
NCBI-ProteinID:
XP_059441014
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All DBs
Position
ca3:35020319..35037251
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AA seq
1262 aa
AA seq
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MATFLAQFQTIKNSCDHLVIAVEDVSDLWPIVKNGFEERLPFKRACLNNKTRNPVFVEKL
TAEFILTRDSRLRSRFPQEQPLFWFREPYAIVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPNDDQATKLAKKVYAKLEVEFSSKKRERCCKLDIHCPEANFWEGLESKI
MESIRNTMDRRVQFYEDEIRKLSEQRFMPVWNFCNFFILKESLAFLFEMAHLYEDALREY
DELELCYLETVNMIVKHRDFGGVDRGDDQAALLNPGNKPLTQIVQDESFREFEFRQYMFS
CQSKLLFKLNRPLEVASRGYLFIISFSKALALHENILPFCMREVWVITACLDLINATASH
YKDGLLALDIEKEFYRLLGDLYSLCRVKFMRLAYLIGYGIEIERSPVNSASLSMLPWPKP
AVWPAVPPDTLSEIFVKEKMILQETLRGKHFGIQRKSLPLEPSLLLREANRRRASLSAGN
MFEMFEGRPIISDGSGSDASIKMSPLSPPQKVRTSSMSRTNSSPGNFESSIDRPMRLAEI
YVAADHALQHTISNHVLRKSLSSLEEFEKKYLELTKGAADNYHRSWWKRHGVVLDGEIAA
VCFKHGNIDLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLSSCVRLLS
LDKGLFSTKERQAFQSEVVHLAHSEMKHPVPLDVSSLITFSGNPGPPLELCDGDPGSLSV
TVWSGFPDDITLDSLSLTLMATYNGDEGVKALKSSSAIVLKPGRNTITLDLPPQRPGSYV
LGVLTGQIGHLRFRSHSFSKGAPADNDDFMIYEKPTRPILKVFKPRALVDLAAAISSALL
INEPQWVGIIIRPMNYSLKGAVLHIDTGPGLKIEESHVIEMESYVDVSQSPADMARSDAA
HKDGSLTVDKDFEQLRLHDGRIEFPGWANNVTSILWIPICAISDRLARGSSSVTPQRQSI
VDGMRTIALKLEFGVSHNQIFERTLAVHFTDPFHVSTRIADKCNDGTLLLQVILQSEVKA
TLTIYDTWLDLQDGFVHTRKGDGRPTSGLTPLIISPHSRAGILFSICLEMSNAEDEAKAP
QPDSILNLRYGISGDRTIGAHPPVAVESPGPEGVRQDLIFRSALVLQRPVLDPCLAVGFL
PLPSGGLRVGQLVSMKWRVERLRDFKEDEVSKHNDEVLYEVNANSDNWMIAGRKRGHVSV
STKQGSRIVISILCMPLVAGYVRPPQLGLPDVEEATISCNPAGPHLVCVLPPPLSSSFCI
PA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctttctcgctcagttccagacgatcaagaattcttgtgatcacctcgttatt
gcagtggaagatgtgagcgatttgtggcccattgtcaagaatggatttgaggagcggttg
ccattcaaaagagcatgtttaaacaacaagacccggaatcctgtgtttgtggagaaattg
actgctgagttcatattaacgagagattcaagacttcgtagccggttccctcaggagcag
ccactattttggtttcgggagccatatgcaatagtggttcttgttacctgtgaggatctt
gatgagttcaaaaccatccttaaaccacgcctgaaattgattgtccaaaatgacgagcgg
gagtggtttattgtattcgtgtctaaagctcatccaaatgacgatcaggctacaaaattg
gcaaaaaaagtatatgccaaacttgaagttgaatttagctccaaaaagagagagaggtgc
tgcaaattagatatacactgccctgaagcaaatttttgggaaggcctggaatctaagatt
atggagtcgatcagaaatacaatggataggcgtgttcagttttatgaggatgagatacgc
aaactcagtgaacaacgcttcatgccagtctggaacttctgtaatttttttatcttgaag
gaaagcttggcttttttgtttgagatggctcatctttatgaagatgcgttacgggagtat
gatgaactagaactctgctatttggaaacagttaatatgatcgtgaaacacagagacttt
ggaggagtagaccgtggtgatgatcaggcagcattgcttaatcctggaaataaaccattg
acgcagattgttcaagatgagtcgtttagggagttcgaatttagacagtatatgttttcc
tgtcaatcaaagcttttgttcaagctgaatcgcccccttgaggttgcttcaaggggttat
ttattcataataagcttctcaaaggccctggcactgcatgagaatattctacccttttgt
atgcgtgaagtttgggtaataactgcctgcttggatttgatcaatgcaactgcttctcat
tataaggacggacttctggcactggatatagaaaaggagttctaccgccttctgggtgat
ctttattcactgtgcagggttaagttcatgaggcttgcatatttgattggatatggaata
gagattgaacgaagtcctgtcaacagtgcttcactcagcatgctaccttggcccaagcca
gcagtttggcctgcagttccacccgatactttgtctgagatttttgtgaaggaaaagatg
attctccaagaaactcttagaggcaagcactttggtattcagaggaaatcattgccgctt
gaaccttcccttcttttgcgtgaggctaatcgacgaagggcttctctttctgctggaaat
atgtttgaaatgtttgaaggtcgcccaattatcagtgatggatcaggttcagatgcatcc
ataaagatgtccccactgtcccctccacaaaaagtccgtacaagttccatgtcgcgcact
aactcttcacctggaaattttgagagctcaattgatcgacctatgagacttgctgagatt
tatgttgctgctgaccatgctttgcagcatacaatttctaatcatgttctacggaaatct
ttatcatcattagaggagtttgagaaaaaatatctggagctaactaaaggcgctgctgac
aattaccatcgctcctggtggaaaagacatggcgttgtccttgatggtgaaatagcagct
gtctgcttcaaacacggaaatattgatctcgctgcaaagtcatatgagaaggtctgtgcc
ttatatgccggtgaaggatggcaggatttattggctgaagtccttccgaatttagctgag
tgtcagaagatacttaatgatcaagctggttacctatcgtcttgtgtgagactgctttca
ctagataaaggcttattttcgaccaaggaacgccaagcatttcagtctgaagttgttcac
cttgcacacagtgaaatgaagcaccctgtacccctagatgtatcttctttaattacattt
tctggcaatcctggacccccgttggagctatgtgatggggatcctggtagtttatctgtg
acagtttggagtggctttcctgatgatattactcttgattcactcagtctcacattgatg
gctacatataatggtgatgaaggtgtcaaggcattaaagagctcttctgctatagttcta
aagcctggccggaatacaattaccttggatttacccccccaaagaccaggctcctatgtc
ttgggagttcttactgggcagattgggcatttgcggtttagatctcatagtttttccaag
ggtgcccctgcagacaatgatgattttatgatatatgaaaagccaactagacctatcttg
aaggtttttaaacccagagccttggttgaccttgctgcagctatttcatctgctttgcta
ataaatgaacctcagtgggttgggatcataatacggcccatgaactactccctcaaaggt
gctgtattgcatatagatactggtccagggctgaagattgaagagtcgcatgtcattgag
atggagagttatgttgatgtgtcacaaagtcctgctgacatggcacggtctgatgcggct
cataaagatggttctttgactgttgataaagattttgagcagttgagactccatgatggc
aggatagagtttccaggttgggcaaataacgtgacttctattctgtggattccaatatgt
gccattagcgacaggcttgccagaggatcatcttcagttacccctcagagacagagtatt
gtggatggaatgaggacgatagctctgaagcttgaatttggagtatcccacaaccagata
tttgagaggaccttagccgtccattttactgatcctttccacgtgagcacacgcattgca
gataaatgcaatgatggaactttgcttttgcaggtgatactacaatcagaagtgaaggcc
acattaaccatctatgatacttggcttgatcttcaagatggatttgttcatactcgaaaa
ggtgatgggagaccaacttcaggcctcacccccctcatcatttctccacattccagagca
ggaatactgttcagtatatgcttagagatgtcaaatgctgaagatgaagctaaggcacca
caaccagatagcatattaaatctcagatatggaatttctggtgataggactattggagca
cacccgcctgtggctgtagaatctccaggacccgagggtgttagacaggatttgatcttc
aggagtgctcttgttttgcaaaggcctgtgcttgacccatgcctggccgttggttttctt
cctctcccttctggtggccttagagttgggcaacttgttagcatgaaatggagggttgaa
aggttaagagatttcaaggaggatgaagtttccaaacacaatgatgaggtgttgtatgaa
gtcaatgcaaattcagataattggatgattgctgggaggaaaagagggcatgtttctgtc
tccacgaagcaaggttccaggatagttatctcaatattatgcatgccactggtagcaggc
tatgttcgtcccccacaacttggactgccagatgttgaggaggcaactataagttgcaat
cctgccgggcctcacctggtttgtgtcttgcctccgcctctcagctcctccttctgcatt
ccagcatga
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