Corylus avellana (European hazelnut): 132173787
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Entry
132173787 CDS
T09426
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
132173787
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cave04040
]
132173787
Ion channels [BR:
cave04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
132173787
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF4233
UBM
Motif
Other DBs
NCBI-GeneID:
132173787
NCBI-ProteinID:
XP_059441376
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Position
ca3:3829803..3833224
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AA seq
697 aa
AA seq
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MHSVHHPLYTTSARFRRGFPKSFSLRRKVPAWRDLILDPGSELVTQWNHVFLVTSLLTLF
LDPLYFYLPVIGGPACMQIDVGLGVFITFLRTVADLFHLLHMVMKFRTAFVAPSSRVFGR
GDLVVNSSAIASRYLRSDFLVDLAATLPLPQIVIWFVIPAVKNRTAAHANHTLSLIVLLQ
YVPRFFVIFPLHRRIIKTTGSIAKTAWAGAVYNLLLYILASHIFGASWYLLSIQRQLKCW
SIECINEMNATHSPSCDPLFLDCNSLDKPERRAWLNVTKVLTSCDARKDYSFQFGMFADA
FTNDVASSIFIEKYFYCLWWGLRNLSSYGQTLVTSTFSGETLFSILISISGLVLFSHLIG
NMQSYLQSTTARLEEWRVRRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESIL
RSLPLDLRRQIQIHLCLALVRRVPFFAQMDNQLLDAICERLVSSLNTKDTYMVREGDPVN
EMLFIIRGQLESSTTDGGRSGFFNSITLRAGDFCGEELLTWALMPTSSLNLPSSTRTVKS
ITEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQVAWRRCMKRKK
EMELARQEDFFYTHILEQDFNYRDGSGADYVDISGAERLSSVDNAHNAQNLGATILASKF
ATNTRRGVQHKSDATSLQMPKLFKPEEPDFSSDTEDS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcgtccaccacccactctacaccacctccgctcgtttccgccgtggcttcccc
aagtccttctcgctccgccgcaaggtcccagcttggcgggacctgatcctggacccgggc
tcagagctcgtcacccaatggaaccacgtcttcctcgtcacctccctcctcaccttgttc
cttgaccctctctacttctacctccccgtcatcggcggtcccgcctgcatgcagatcgac
gtcggcctcggcgtcttcatcaccttcctcaggaccgtcgccgacctcttccacctcctc
cacatggtcatgaagtttcgcaccgcctttgtcgctcccagctctcgtgtcttcggccgc
ggcgaccttgtcgtcaactcgtccgccatcgcctcccggtatctgaggtcggatttcttg
gttgatctcgctgccacgctgcctctcccccagatagtcatatggttcgtaattccagcg
gtgaaaaaccgaacagctgctcatgcgaaccacacgctttctctgattgttctccttcag
tatgttcctcgtttttttgttatttttcctttgcaccggcggatcatcaaaaccaccgga
tctatagccaagactgcttgggcaggggcagtgtacaatctccttctctatattttagct
agccatatttttggagcttcatggtatttgttgtcaattcagcggcagctcaagtgctgg
agcatagagtgcataaatgagatgaatgccacacactctccgtcatgtgatcctttgttt
cttgactgcaacagtttggacaaacccgaaaggcgggcttggctgaatgtaactaaagtg
ctcactagctgtgatgctcgaaaagattactctttccagtttggaatgtttgctgatgcc
tttactaatgatgttgcttcttctattttcattgagaagtacttctattgcctgtggtgg
ggtttgaggaatttaagctcatatggacaaactctagttacaagcacttttagcggtgaa
acattgttcagcattctcattagcatatctggtcttgttctgttctcacacctcataggc
aacatgcagagttatctgcaatctacaacagcaagactagaagaatggagggtcagacga
agagatacagaggagtggatgaggcaccgtcaattacctccagaattgcaggagcgtgtt
cgtcggtttgttcaatacaaatggcttgctacaagaggtgtagatgaagaatccattttg
cgctctttgcctctggaccttcgccgtcaaattcaaatacatctttgtctcgcccttgtt
cgccgcgttccttttttcgcgcaaatggataatcagctcttagatgccatctgtgaacgc
cttgtgtcgtcgttgaatacaaaagacacatatatggtcagggagggtgatccagtgaac
gagatgctattcatcattagagggcagctggagagctccacaaccgacggtggaagatca
ggattcttcaactctattaccctcagagccggcgatttttgtggggaagagttgctgaca
tgggctctaatgcccacctcaagcctcaaccttccatcatcaactcgaacagtgaagtcc
attactgaagttgaggcatttgctcttcgagctgaagacctaaagtttgttgccagccag
ttcaagcgcctgcatagcaagaaactccagcatgctttcaggtactactcccaccagtgg
agaacatggggagcttgctttatacaagttgcatggagacggtgcatgaaaagaaagaag
gaaatggagttggcaagacaagaggacttcttttatacacatattttggaacaagacttt
aactatagggatggatcaggcgcagattatgtggatattagtggtgctgaaagattgtca
tcagttgacaatgcacataatgctcagaacttgggagctacaattttggcttcaaaattt
gctacaaacaccagaagaggggttcaacacaagtctgatgcaaccagcttgcagatgccc
aagctgtttaagccagaggaacctgatttctcatcagacactgaagatagttga
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