Corylus avellana (European hazelnut): 132173861
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Entry
132173861 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132173861
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132173861
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132173861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_GCN1
Dpoe2NT
DUF1848
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
132173861
NCBI-ProteinID:
XP_059441493
LinkDB
All DBs
Position
ca3:complement(5584314..5613461)
Genome browser
AA seq
2705 aa
AA seq
DB search
MATPSHAQAVKSLNKAPGRRRFVFKTFSQRVEEIDIDVFRSLDKVKAEPSEGSSFFRDCL
IEWRELNTAEDFISFYEEMLPLVQTLPLILLHKELILSKLLSRLQMKARLSLEPILRLIA
ALSRDLLVDFVPFLPRIADSFVSLLESGADREPEIIEQIFTSWSYIMMYLQKYLIRDLVY
LLKVTVQLRFYPKDYVQEFMAEATSFLLRNAPDEQLQDGIRKIMIEVMKKPLPTRKFGAS
TLLCYVLRGASSRFHSKAERVLQLLMDSTILGSDSVVEVVSTAFQRLCEEIEPKELDLIP
KCIYQKINDGVTNGCILHLSHLLSLLISIVQIHNGRRFYDYQSLLEHVGFLVQIFVMSSG
FEKAEVPQTEVVDKVLELMICILNGLHNFNNISAISSCSLQWAPVFTLRNLSLLKFIREL
LQKDPCIVYIFGVNILSAMNDLIETSEEEVIYLLLSFFEVMEAKVQESNFSDGTFRKEFP
KMEEAISRWIGEINIIVHGDPSSCHIHETKWALLWGIIRCLPCMKLIAEVNVQWMSSCLM
KLIDALDQLPLTEDGCIAGLPKQAYQSVIGAALSSYNKLLNATKSGPEETSKFLNLAKRH
GSSSQVLSAVADYLDFVYGPTSEADSCNRKYHPELSVENAVDALSIFADNLHHSNRGIRV
STLKILCHHELLNCVDSTNDQLVEKQMKTEVSQTSLVDSLGNNVLQLLLSIEETPLSIST
SRKVILLISRIQMDLSAGRVPQAYVPLVLSGIVGILNNRFSYLWNPALECLGVLMSQHVR
LIWNKFVCYLEQYQSMFHTSHELDRGNYKLYDESSDLVQRFHLFVTPESDSTPFAMVLSL
LLQSLQKIPNVIESQSRELIRLFLKFLGYNLNDHVSVEFFNSHACKGKEWKGVLKEWLNL
LRAMRNLRSFDESQHLKEVLQNRLLDDNDAEIQTKVLDCLLIWKDGFLLPYDQHLKNLIN
SKYLREELTTWSLSKESNQIEEEHRAYLVPIVIRLLMPKVRKLKTLASRKNASVLHRKAV
LGFIAQLDVEELPLFFVLLIKPLQICSKETDSTSYWLRTSWENSMAYNFLKYFTVDNIVA
LSWKKRYGFLHVIEDVLGVFDEFHVRPFLDLLMGCVVRVLGSCTSSIDVAKCNGFSSLED
HSNADLTVLEKDSASASDVQTSSAVKQFKALRSLCLKIVSLVLNKYEDHEFGCEFWSLFF
ASVKHLVDGFKQEGSSSEKPSSLFSCFVAMSRSHRLVSLLSWEKNLVPNIFSILSEMKAS
KAIVSCVLTFVENLLNLDSELNDEADATKRVLLPNLEALICSLHDLFQSDSATKRKLVKC
PGEREIRIFKLLSKYIKDPLPATKDPLPATEDPLPAKFLDILVPFITKRSKNCDLYSEAV
QVIRDIVPVLGSKSTKKILTAVTPLLASVALDMRLSICDLLDSLAEADPSVQFLAKLVRK
LNATSATEMGSLDYDAIMDGYNEICIDFFYTVHEDHASVILSHCVYDMSSEELILRHSAY
GSLLSFVEFSAQILGQEGKGHQEMTCKMITHDDGCWTRASFPRKTIKFLLKHMGDALSRE
TTIKKEWINLLREMVMKLPEVANLNSLRALCSSDAEVDFFNNIVHLQRHRRARALSRFRN
VISTSNMSEDILNKVFVPLFFSMLFDIREGNGEHVRVACIEALASVSGHFEWKSYYALLV
RCLQEMTMNPGKQKHLLRLTCSILDRFHFSEIHNNQKANDSLENASDAGTISSCSSAMAT
EIQRCLHNTVLPKIQKLLNSDSDKVNVNINLAALKLLKLLPVDIMDSMLPSIIHRISNFL
KNRLESIRDEARSALAACLKELGLQYLQFIVRVLRATLKRGYELHVLAYTLNFILSKSIL
IPNSGKLDYCLEDLVSVIENDILGDVAEEKEVGKIASKMKETKMRQSFNTLELIAQSITF
KTHALKLLSPVTTYLQKQLTPKVKTELEKMLNHIAVGIERNPSVDQTDLFIFVYGLIEDG
IKDENGQREISVIAEEKKHHRKDLREKRITSGRLVNVSSHLLIVFALRMLHKRTRSLKQG
KIEHALSMLDPFVTLLGNCLASKYEDVLSSSLRCLTPLVRLPLPSLESQADKIKEAVLDI
AQSSVTSSSPLMQSCLRLLVVLLRSTRITLSSDQLHQLIQLPLFVDLEREPSNLALSLLK
AIVNRKLVVPEIYDLVTQVGELMVTSQVDSIRKKCSQILLQFLLDYQLSVKRLQQHLDFL
LSNLRYEHSTGREAVLEMLHVIIVKFPSKNVDEQSETLFVQLVVCLANDEDSRVRSMTGA
AIKKLFGCVSSHSLDYILEDTLSWYSGETQRLWSAAAQVLGLLVEVMKKGFQKHVNRVLP
VTRKILQSAISVVTSRQLDVSEEIAVAFWREAYYSLVMLEKMLRQFNYLCFESDLEEIWE
AICTLLLHPHMWLRHISTRLIALYFASVIEAQKENEEKAFGTYFLMKPSRLFLIAASLYC
QLKTQLTDDDASNLITQNLVFAICGVHSLMGHMEYVDSPKFWSTLEQHEQGHFLKAFELL
DSRKGRSMFLSLSSGVFDQKEQAQSKDIRYLLISYLLKRMGKVSLQMEAIQMKIVFNSFS
KISSEISQDNCLHYASQMLQPLYKVCEGFAGKVIPDDMKQLAQEVCETIKNILGQNFVQV
YSEIRKNLKAKRDKRKQEEKLMAVVNPMRNAKRKLRIAAKHRANKKRKMTATKMGRWMPK
KQRTL
NT seq
8118 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccatcgcatgcacaggcggtgaagtccctaaacaaagccccgggccgccgc
cgttttgttttcaagacgttctcccagagggtagaagagattgatatcgatgtcttccgg
agcctcgacaaagtgaaggctgagccctcagaggggtcctcctttttccgggattgcctc
atagaatggagggaattgaatactgcggaggatttcatttcgttttacgaggaaatgttg
cccttggtacaaacattaccattgattttattgcacaaggaattaatattatcgaaactt
ctctctagattacaaatgaaagcaaggctatcgcttgagcctattcttaggttaattgca
gctttatctagagatctcttggtcgattttgttccctttctgccaaggattgctgattct
ttcgtgtctcttctagaaagtggtgctgacagggagccggagattattgagcagattttt
acatcttggtcatacattatgatgtatttgcagaagtatttgatacgcgatcttgtgtat
ttgctcaaggttacagtacaactaagattttatcccaaggattatgtccaagaatttatg
gcagaggctacatcattcttgcttaggaatgcaccagatgagcagctacaggatggcatt
agaaagataatgattgaagtcatgaagaaaccattacctaccagaaaatttggcgccagc
actttactttgttatgttttgagaggggcctcatcaaggttccactcaaaagcagagcga
gtattacagttactgatggacagtacaatacttggttcagactctgttgttgaagttgtg
agtactgcttttcaaagactgtgtgaggagatagagccaaaggagttggatttgatcccg
aaatgcatatatcagaaaattaatgatggtgtaactaatggatgcattttgcatttaagt
cacctcctatcactgcttatttccattgttcagattcataatggtcgaaggttttatgat
taccaatcgttgcttgaacatgtggggtttcttgtgcaaatatttgtcatgtcttctggc
tttgagaaggcagaggttccccaaacagaagttgttgataaggttctcgaattgatgata
tgcattctcaatgggcttcacaactttaataatatatcagctatctctagttgttcattg
caatgggctcctgtattcacattaaggaacttgagtttgctgaaatttattagagaacta
ctgcagaaggacccttgcatagtatatatttttggagttaacatcttaagtgcaatgaat
gatttgatagagacttcggaagaagaagtcatatatttattactgtccttctttgaagta
atggaagcgaaagtgcaagaatccaacttctcagatggcacatttagaaaagagtttcca
aagatggaggaggctatctcccgttggattggggaaataaacattattgtgcatggtgat
ccatcatcttgtcatattcatgagactaagtgggctctactgtggggaataattagatgc
ttgccttgcatgaagttgatagctgaagttaatgtccaatggatgtcatcctgtttgatg
aagttgatagatgcacttgatcagctaccgttgacggaagatggttgcatagcaggtctt
cctaaacaagcctaccaaagcgtaattggcgctgctttgagttcttataacaaattactt
aatgctacaaaatctgggcctgaagaaacgagtaaatttttgaatctagcaaaaagacat
ggatcatcttcacaagtattgtctgctgttgctgattatttggattttgtgtatgggccc
acgtcggaagcagacagttgcaatagaaagtatcatccggaactttcagtggagaatgct
gtggatgcattaagcatctttgctgataatttgcaccactcaaatagggggatacgcgtt
tcaactcttaaaatattgtgtcaccatgaacttctaaactgtgtagattctacaaatgat
caactggttgagaagcaaatgaaaactgaagtttctcagacatcccttgtagatagtctg
ggcaataatgttcttcagttgcttctctcgattgaggaaactccgctttcaatttctacc
agccgaaaagtgatcctattgatttctagaatacagatggatctctctgcgggcagagta
cctcaagcctatgtgccccttgttttgagtgggatagttggtatattgaataaccgtttt
agttatctttggaatccagcattggagtgccttggagttttgatgagccagcatgttcga
cttatatggaataaatttgtttgttatcttgagcaataccagtcaatgtttcatacatcc
catgaactagacagagggaactataaactctatgatgagtcaagtgatcttgtccagcga
tttcatttgtttgttactccagaatctgatagcactccatttgcaatggtattatccttg
ttgctccaatcattgcaaaagattccaaatgttatagaatctcagtctcgggagttaata
cgtttgttcttaaagtttctgggctataatctcaatgatcatgtaagtgtggaatttttc
aattcacatgcttgtaaaggcaaagagtggaagggtgtccttaaagaatggttaaacttg
ctgagagcaatgcggaacctgagatcttttgatgagagtcaacatcttaaagaagttctg
caaaataggcttctggatgacaatgatgctgaaatccagacgaaggttcttgattgcctg
ttaatttggaaggatggtttcttactcccatatgatcaacatctgaaaaatttaataaac
tccaaatatttgcgagaggagctaacaacatggagtttgtccaaagaatctaatcagatt
gaagaagaacacagagcttatcttgtgcctatagttatccgtcttctgatgccaaaagtt
agaaaattgaagacacttgcctcgcgaaagaatgcaagtgttcttcaccgaaaggcagtt
cttggtttcattgctcaacttgatgttgaggagcttcctcttttcttcgtattgttgata
aagccattgcaaatttgttctaaagaaactgatagtacttcttattggttgcggacttca
tgggaaaattctatggcatataatttcttaaagtatttcaccgtggataatatagtagcc
ctgtcttggaagaagagatatggttttctgcatgtgattgaagatgttctaggagttttt
gatgagtttcatgtcagaccttttcttgatcttttaatgggatgtgttgttcgggtgctg
ggaagctgcacatcaagcattgacgttgcaaagtgcaatggattctcctcacttgaagat
cattctaacgctgatctgactgtacttgagaaagacagtgcatcagcaagtgatgtccag
accagcagtgctgtgaagcagttcaaagctttaaggtctctatgcctgaaaattgtttct
cttgtccttaataagtatgaagatcacgaatttggttgtgagttctggagcctattcttt
gcttctgtgaaacatttagtggacggtttcaaacaggagggttccagtagtgagaaacca
agttcactgttctcttgctttgttgctatgagtagaagccacaggcttgtatcactcttg
agttgggagaagaatcttgtccctaatatattttccatactgagtgagatgaaagcttct
aaagccattgtatcatgtgttcttacatttgttgagaacctgttgaaccttgatagcgaa
ttaaatgatgaagcagatgctacaaaaagagtcctacttccaaacctcgaggcacttatc
tgcagcttgcatgatcttttccaaagtgatagtgcaaccaagaggaagttggtcaaatgt
cctggggagagagaaataagaattttcaaattattatcaaagtatataaaggatccgttg
ccagcaacaaaagatcctttgccagcaacagaagatccgttgccagcaaaatttctagat
atcttggtcccattcataacaaaaagatctaaaaattgtgatctttattctgaagctgtg
caagtcattcgagatattgtcccagtgttagggagcaaaagtactaaaaaaattctgaca
gcagttaccccgctacttgcttctgttgcactggatatgcggttgtctatttgtgatctt
cttgattcacttgctgaagctgatccttctgtccagtttctggccaaacttgttcgtaaa
ttgaatgcaacctctgctacagaaatgggtagccttgattatgacgctatcatggatggt
tataatgagatttgtattgatttcttctatactgttcatgaggatcatgcatcggtcatt
ttatcacattgtgtgtatgatatgtcatctgaagaattgatcttaaggcatagtgcttat
gggtcactgctctcgtttgttgaattttctgcccaaatccttggccaagaaggaaagggt
caccaagaaatgacttgtaagatgattacgcatgatgatggttgttggactagagcatct
tttccgcgtaaaacaatcaagtttcttttgaagcatatgggggatgcattgagcagagaa
actacaatcaagaaggaatggataaatttactacgagaaatggtgatgaaactaccagaa
gtagcaaatcttaattcattgagggctctgtgcagtagcgatgctgaagtagattttttc
aacaatattgttcatttgcagaggcataggagagcaagggcattgtctcgttttaggaat
gttatcagtacaagcaacatgtcggaggatattttaaataaagtttttgtgccactcttt
tttagtatgttgtttgacatacgagaaggaaatggagaacatgttagagtggcatgcata
gaggcccttgcttctgtttctggtcattttgaatggaagtcatactatgcgttactggtt
agatgcctccaagagatgactatgaatccaggcaagcaaaaacacttattgaggctaact
tgctccatattggacagatttcatttttcagagattcataataaccaaaaagccaatgac
tctttagagaatgcttctgatgctgggacaattagtagttgttcttcggctatggcaact
gagattcagagatgccttcataatactgtgctcccaaagatacagaagctactcaattct
gattctgataaggtcaatgttaacatcaatcttgctgcccttaaactactaaagttgctc
cctgtggacataatggactcaatgcttcctagcatcattcatcgtatttctaacttctta
aagaatcggttggaaagcatacgtgacgaagctaggtctgctttggctgcttgtttgaag
gagcttgggctgcaatacctgcagtttatagtcagggttttgcgagctaccttgaaacga
ggatacgagctgcatgtattggcatacactctcaatttcatcttgtccaagtctatttta
attcccaatagtgggaagttggattactgtttggaagatcttgtttcagtaatagagaat
gacattcttggagatgttgctgaggaaaaagaggtgggaaagattgcttcaaaaatgaaa
gaaactaaaatgcgacagtcttttaataccctggaattgatagcccagagtataacattc
aaaactcatgccttgaagcttctttcacctgttacaacatatttgcagaagcagctcacg
ccaaaagtcaaaactgaattggaaaaaatgttaaatcacatagctgttggcattgaacgt
aatccatctgtagatcagactgacctgttcatctttgtatatggcctcattgaagatggg
attaaagacgaaaatggtcagcgtgaaatttcagtaattgcagaggaaaagaaacatcat
agaaaggacttgagagagaaaagaataacttcaggccgacttgtcaacgtatcttcacat
cttcttattgtgtttgctctcaggatgttgcataaacgcacaagaagtttgaaacaggga
aaaattgagcatgcgttatcaatgttggatccttttgtcacacttttagggaactgcttg
gcttccaagtacgaagatgttttatcttcgtcccttagatgcctcactccgttggtcagg
ctgcctttaccatcccttgaatctcaagctgataaaataaaggaggcagtcttggatatt
gcacagagttcggtaacttcaagcagtcctctaatgcagtcatgcctaagattgttggtt
gtacttctgaggagcaccagaatcaccctttcatcagatcagttacatcagttaattcag
cttcctctttttgtagatcttgaaagggaaccttctaatcttgccctttcattgctgaag
gcaattgttaatcgcaagcttgttgttcctgagatatatgatcttgtaactcaagttggg
gaattgatggtgacaagtcaagttgactcaattcgcaagaaatgcagtcaaattttatta
cagtttttacttgattatcagctttcagtaaaacgtttgcaacaacatctagattttctg
ctttcaaatttaagatatgagcattcaactggaagagaagctgtccttgaaatgcttcat
gtaatcattgtcaaatttccaagtaaaaatgtggatgagcaatcagagacattatttgtg
cagttggtggtttgcttagccaatgatgaagatagtagggttcgttccatgactggtgca
gctataaagaagctctttgggtgtgtaagctcacattcacttgattacattcttgaggac
acattatcttggtattcgggagagacacagcgactgtggagtgctgctgcacaggtcttg
ggattactagttgaggttatgaagaaaggatttcaaaaacatgttaatagggtactgcca
gtgactagaaaaattttacagtctgccatcagtgttgtcaccagtaggcaactagatgtt
tctgaggaaattgctgttgctttctggagagaggcatattattcacttgttatgttggag
aagatgctgcgtcagttcaattatttgtgctttgaaagtgatcttgaggaaatctgggag
gcaatctgtacgttgcttttgcacccacatatgtggctacgccacatatcaactcgcctc
atagccttgtactttgccagtgtaatagaagcccagaaagaaaatgaagaaaaagcattt
ggaacttattttcttatgaagccaagtagactttttcttatagctgcttccctctactgc
caattgaagacgcaactaactgatgatgatgccagtaacctgataacacaaaatcttgtg
ttcgcaatatgtggtgtgcattctttgatgggacatatggagtatgtggattctcccaag
ttctggtctacccttgaacagcatgagcaaggccattttcttaaagcttttgaattgctt
gattcaagaaaaggaagaagcatgtttttgtcactttcatctggtgtatttgatcaaaag
gaacaagcccagtccaaggatattcgatacttgttaatttcttatttgcttaaaagaatg
ggaaaggtttcccttcaaatggaggctattcagatgaaaattgtattcaatagtttttca
aaaatttcatcagaaatcagtcaggacaattgcctccattatgcatctcaaatgttgcag
ccgctgtataaagtttgtgaagggtttgctgggaaagtgatccctgatgatatgaagcaa
ttggcacaagaagtttgtgaaactataaagaatattttaggtcagaactttgtacaagtt
tacagtgagattaggaagaatctcaaggcaaaaagggataagaggaaacaagaagaaaag
cttatggctgttgtcaatccaatgcgcaatgccaagaggaagttgagaattgcagctaag
catcgtgccaataagaaaaggaagatgacggcgacgaaaatgggaagatggatgccaaag
aaacaaaggacattgtga
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integrated database retrieval system
