Corylus avellana (European hazelnut): 132174540
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Entry
132174540 CDS
T09426
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 16-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132174540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cave02000
]
132174540
04147 Exosome [BR:
cave04147
]
132174540
04090 CD molecules [BR:
cave04090
]
132174540
Enzymes [BR:
cave01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132174540
Transporters [BR:
cave02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132174540
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132174540
CD molecules [BR:
cave04090
]
Proteins
132174540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
ABC_ATPase
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_22
AAA_15
nSTAND1
G-alpha
AAA_25
DLIC
Motif
Other DBs
NCBI-GeneID:
132174540
NCBI-ProteinID:
XP_059442161
LinkDB
All DBs
Position
ca3:36558691..36565346
Genome browser
AA seq
1163 aa
AA seq
DB search
MRAKGSIFRYADRLDMLLMLLGTLGSIGDGLQNPLMMFIVSGVINDYGNGNKNPLTNDVV
DKYALRLLYAAIGVGLSAFVEGLXWARTAERQTSRMKMEYLKAVLRQDVGFFDTQTAGTS
TTNQVVTLISSDANSIQVALCEKIPDCLAYMSTFFFCHISAFTLSWRLTPAAIPLSVTFI
TPGLVFGNIMTGLAMKMIESYGVAGGIAEQAISSVRTVYSYVGESQTLERFSRALQTTLE
FGVKQGRVKGVLMGSMGIIYVGWGFQAWVGTYLVTQKHEMGGHVIIAGFNVIMEGLSVLS
ALPNLTGITEATTAASWISEMIDRVPPIDSEDTKGKALSYVRGEIEFLKTYFNYPSRPET
PILQDFNLXVPARNRVGLVGGSGSGKSTVIALLERFYEPIEGDILFDGYNIRRLQLKWLR
SQLGLVNQEPVLFATSIKENILFGKEGASMDSVINAAKAANAHDFIVKLPDGYETQVGQF
GFLLSGGQKQRIAIARTLLRDPKILLLDEPTSALDVQSERIVQEAIDLAFKGKTTIIIAH
RLSTIRTANLIVVLQAGKVVESGSHSELMQMNGGQGGEYSKMGQLQQVVMQNEASNIPSS
PVEGRSHHKMNIPSSPISVRSSTSGSGAKSKFKVLSLVFLGIGAFNFFSNIIQHYNFAVM
GERLTKRVRENLLEKLMTFEIGWFDQDENTSAAICARLATEANMVRSLVGDGFRISLLVQ
AVSATFAYIIGLVLTWRLSLVMIAVQPLVIGSLYSRTVLTKSMSEKVRKAQKEVSQLASE
AVINHRTVTAFCSQKRILGFFGATLRGPRKASVQQSWVSGFGLFSSQFFNTASTALALWY
GGRLQTQGLIEPKHLFQAFFILLFTAYVIAEAGSMTNDLSRGNTAIQSVFDIFDRRSEID
PENTSGLNIKRRIKGRVELKNVFFAYPARPDQMIFKGLSLKIDAGKTVALVGQSGSGKST
IIGLIERFYDPLKGSVYIDEQDIQNYNLRMLRSHIALVSQEPTLFAGTIRENIVYGKENA
TESEIRKAAVLANAHEFISGMKDGYDTYCGERGAQLSGGQKQRIALARAILKNSSILLLD
EATSALDSMSENLVQEALEKMMVGRTCVVVAHRLSTIQKSNSIAVIKNGKVVEQGSHNEL
ISFGRRGEYHSLIKLQGSSSPNQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagggccaaaggtagcattttccgatatgcagatcgcctggacatgttgctgatgctg
ttggggactttgggcagcattggagatgggttgcagaaccctctgatgatgttcattgta
agtggtgtgataaatgattacggaaatggcaacaagaaccctttgacaaacgatgtggtt
gacaagtatgctctcaggctgctctatgctgcaattggagttggactttctgcttttgtg
gaagggctatgatgggcaagaactgcagagaggcagacttctcggatgaaaatggagtac
ctgaaagctgtccttagacaagacgttggtttctttgacacccaaactgctggcacttca
acaaccaaccaagttgtgacactcatctcctcggacgccaattcaatccaagttgcttta
tgtgagaagatacctgactgtcttgcttacatgtcgactttcttcttctgccacatatct
gccttcacactatcgtggagacttacaccggcggctataccactttcagtaacgttcatc
actccaggacttgtgtttgggaatatcatgacgggcctggcaatgaagatgattgaatct
tatggagttgctggagggattgcagaacaagctatttcttcagtaagaactgtatattct
tatgtgggggagagtcagacactagaaagattcagccgtgcacttcaaacaactttggaa
tttggagtaaaacaaggacgtgtaaagggagtgctgatggggagcatgggaattatatat
gtaggttggggttttcaggcttgggttgggacttatttggttactcaaaaacatgaaatg
ggtggccatgtgatcatagctgggtttaatgtaatcatggaaggactgagtgttttgagt
gcgctccctaatctaactgggattacagaggcaacaactgctgcctcttggatttccgag
atgattgatcgggttccacctatagactctgaagatacaaaggggaaggctttatcatat
gttagaggagaaattgaatttttaaagacatattttaattatccatcaaggcctgagacg
ccaatcttacaagacttcaatcttnacgttccagcacgtaatagagtaggtcttgttggg
ggcagtggttcaggcaagtccacagtcattgcactgcttgaaagattttacgaacccatt
gaaggagatatactctttgatggctacaatataagaagacttcagttgaaatggttgaga
tcccaactgggtctagtaaatcaggaacctgttctatttgcaacatccattaaagagaat
atactatttgggaaagaaggagcttcaatggatagtgtcataaacgcagccaaagcagcc
aatgcgcatgacttcattgtcaagttaccagacggatatgaaactcaagttggccaattt
ggattcctattgtctggcggtcagaagcaaagaattgccatagccagaactctactcagg
gacccaaaaatcctgctgctagatgaacccactagtgcacttgatgtacagtctgaaagg
atagtgcaggaggcaattgatctggcgttcaaagggaagacaacaatcatcattgcccat
cgcctgtccacgatcaggacagcaaacctgattgtggttcttcaagctggcaaagtagtt
gaatcaggttcacacagtgagctgatgcaaatgaatggtgggcaaggtggggaatattcc
aagatggggcagttgcagcaggtggtaatgcaaaatgaagcttccaacattcccagttct
ccagtagagggaagaagccaccacaaaatgaacatcccatcaagcccaatcagcgtgaga
tcgagcactagtggctctggagcaaagtctaaattcaaagtcttgtcccttgttttctta
ggcattggtgctttcaactttttctccaatatcatccaacactacaattttgcagttatg
ggagaaagattgacaaaaagggtgcgggagaatctactcgagaaattaatgacctttgag
attgggtggtttgatcaagatgagaacacaagtgcagccatttgtgcaaggctagcgact
gaagccaacatggttcggtcccttgttggggacggatttcggatttcactactggtccaa
gcagtttctgccacctttgcttacataataggactagtcctcacatggaggctatcactt
gtaatgattgccgtgcagccattagtcattgggagcctttactcgaggactgtcttgacg
aagagtatgtctgagaaagtccggaaagcacagaaggaagttagccaactagcaagtgaa
gcagtcattaaccacagaactgtaactgctttttgctcacagaagagaatattggggttc
tttggggcaaccttaagaggtcctaggaaggcaagtgttcaacagtcctgggtttctggt
tttggcctgtttagctcccaattttttaacacagcatcgacagctttggctttgtggtac
ggtgggaggctccagacgcaaggactaatagaaccaaagcatctttttcaagcatttttt
atattgctattcactgcttatgttattgctgaagctgggagtatgactaatgatctatct
agaggaaacactgccattcaatcagtttttgatatctttgatcggagaagtgagattgat
ccggagaacacatcgggattgaacattaaaagaagaataaaaggacgcgtggagcttaaa
aatgttttctttgcatatccagcaagacctgatcagatgatctttaagggcctgagcctt
aagattgatgcagggaaaacagtggcgctagtggggcagagcggttccggaaaatctacc
attatcgggctcattgagaggttttatgatcctttaaagggatccgtctatatagatgaa
caggatattcagaattataatctgagaatgctgagatcacatattgcattagtcagtcag
gagccaactctttttgctggaaccatacgcgaaaatatagtctatgggaaggagaatgct
actgagtcggagataagaaaggctgcagttcttgccaatgctcatgaatttataagtgga
atgaaagatgggtatgacacatactgtggagaacgaggagctcagctatcaggaggccag
aagcagaggattgcactagctcgtgcaatactaaagaactcttcaatccttctgttggat
gaagctaccagtgcacttgatagcatgtcagagaatctagttcaagaagcactggagaag
atgatggtcggcaggacatgtgttgttgttgctcaccggctgtcgacaatacagaaatcc
aactccattgctgtgatcaagaatggaaaggttgtggaacaaggctcccataatgaactc
atttccttcggtcgtcgtggagaataccattctctgataaaactacaaggcagcagctcc
cctaaccaatga
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