Corylus avellana (European hazelnut): 132174830
Help
Entry
132174830 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132174830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132174830
03009 Ribosome biogenesis [BR:
cave03009
]
132174830
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132174830
Spliceosome [BR:
cave03041
]
Complex A
U1 snRNP components
U1 related factors
132174830
Complex B
132174830
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Helicases
132174830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
132174830
NCBI-ProteinID:
XP_059442505
LinkDB
All DBs
Position
ca3:complement(4993115..4997641)
Genome browser
AA seq
656 aa
AA seq
DB search
MNHYDNRYADPSSYRERRSDLIGPPPPVGPPVIGGYGRGGPVPYGGPPPPAYGRGGGSAQ
PAGAGNFNGYPPFEPPVGRFDIGRGGGRTGNGHVGVGDRRVGSVGRGGAGGRGFDLGRGG
GRLGTSRDGGVRSKIGGGGRGGNAGFGGGRGGGRGFEGRGGGGGRGGRHGGGGSRGDLDN
IALPKQDFGNLVHFEKNFYVETPSVRAMSEHEALAYRTRREIMVEGHDIPKPIRVFHEAN
FPDYCLEVIAKLGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP
RLGQGEGPIVLVLAPTRELAVQIQEEAVKFASRANIRSTCIYGGAPKGPQIRDLKRGVEI
VIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA
TWPREVESLARQFLRNAYKVIIGSPYLKANQSILQVVEVVTEVEKYNRLIKLLKESMDGS
RILIFMETKKGCDQVTRQLRIDGWPALSIHGDKSQAERDWVLAEFKTGRSPIMTATDVAA
RGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFLTHANAKFARDLVKILQE
AGQVVSPALSALARSAGSAMGGSGGNFRSRGRGGGYGNRALISGSNVIPLGGRRPW
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactacgacaatcgctacgccgaccccagttcctatcgtgagcgtcgaagtgac
ctgatagggccaccgcctcctgtgggtcctccggtgataggcggctatggccgcggtggg
cccgtcccgtacgggggtccccctcctccggcttatggaagaggtggtgggtcggcacaa
cctgccggggccggtaatttcaatgggtatccgccgtttgagccgcccgttggccgattc
gatattggccgaggcggtggaagaacggggaatggacatgtgggagttggggataggaga
gtgggcagtgtaggccgtggtggtgctggtggaaggggctttgatttggggcgtggcggt
ggtagactaggtacaagccgtgatggtggtgtcaggagtaagattggtggtggagggcgt
ggtgggaatgcgggttttggcggtggacgaggtggtgggaggggatttgaggggcgtggt
ggtggtggtggaagaggaggtagacatggtggtggggggtcgagaggggatttggacaac
attgctttgcccaagcaggattttgggaatttggtccattttgagaagaatttttatgtt
gagactccttcggtgcgggcgatgagtgagcacgaagctttggcttatcggacgagaagg
gagatcatggttgaagggcatgatatcccaaagccaattagggtgtttcatgaagctaat
ttccctgattactgccttgaggtgattgcaaaactgggttttgttgagccaacagcaatt
caggctcaaggatggccaatggctctcaagggtagggatttaattggtattgctgagact
ggttctggtaagactttggcatatctgcttcctgctttggtacatgttagcgcacagcct
cgattgggacaaggtgaaggtcccattgtactggtgttagcacccactagagaattagca
gttcaaattcaagaagaagctgtaaaatttgcgtcacgtgctaatattagaagtacttgc
atatatggtggtgctcctaaagggcctcaaattcgtgatcttaaaagaggcgtggagatt
gtcattgctacacctggtcgactgatagatatgttggaagcccaacacacaaacttgcga
agagtgacttaccttgtgttagatgaggctgatagaatgttggacatgggatttgagcct
caaattaggaaaattgttgcccagatccggccagatagacagacattgtattggagtgcc
acatggccaagggaggttgaaagtcttgcaaggcagtttttacgcaatgcatataaggta
attattggatcaccatatctgaaagcaaaccaatctatacttcaagttgttgaagttgtg
acagaggtggagaaatataataggctgatcaaactgcttaaagaaagcatggacgggagc
cgaattctaatattcatggagacaaaaaaaggatgtgaccaagtcacaaggcaattgaga
attgatgggtggccagctctatccatccatggcgataaaagccaggctgaaagggactgg
gtccttgctgagtttaaaactggcagaagtcctataatgactgccactgatgttgctgca
cggggtcttgatgtgaaggacataaaatgtgtgatcaattatgattttccatcaagcctt
gaagattatgtccacagaattggccgaactggtagggcaggggcaaaggggactgccttc
acgttcttaacgcatgcaaatgcaaagtttgcgagggatctggtcaagatcttgcaagaa
gcagggcaagttgtgagtcccgccttgtctgcattggcccgatcagctggttctgctatg
ggaggatctgggggaaactttcgctccagagggcgaggaggcgggtatggcaatcgggct
ctgatttccggctcaaatgttatcccccttggtggaaggagaccttggtag
DBGET
integrated database retrieval system
